On 03/28/2011 02:43 PM, Edin Villalobos Mora wrote:
Good morning. First, thanks for your help Michael. I typed what you suggest me:kagamin@kagamin-laptop:~$ sudo apt-get -f install [sudo] password for kagamin: Leyendo lista de paquetes... Hecho Creando árbol de dependencias Leyendo la información de estado... Hecho Los siguientes paquetes se instalaron automáticamente y no son necesarios: liblash2 libktnef4 libboost-regex1.40.0 libdebconf-kde0 libqt4-assistant libpackagekit-glib2-14 libkpimtextedit4 libkimproxy4 kpackagekit libjpeg8 libboost-program-options1.40.0 kdelibs5 libkxmlrpcclient4 libdvbpsi5 libgeos-3.1.0 kdesudo libavutil-extra-49 libpackagekit-qt-14 libx264-85 install-package libqgpgme1 libqt4-webkit libboost-signals1.40.0 cvs libqtassistantclient4 libkpimidentities4 libaudid3tag2 libgirepository1.0-0 libao2 packagekit-backend-aptcc libkblog4 python-packagekit libmowgli1 libxml++1.0c2a packagekit gdebi-kde software-properties-kde kdepimlibs5 libkholidays4 update-manager-kde libmodplug0c2 packagekit-backend-apt libsox1a libjpeg-progs virtuoso-nepomuk libsyndication4 libebml0 libmpcdec3 libmatroska0 libgpgme++2 libnetcdf4 Utilice «apt-get autoremove» para eliminarlos. 0 actualizados, 0 se instalarán, 0 para eliminar y 30 no actualizados. My Ubuntu is in spanish, by the way, a 32-bit version ('uname -m' returns 'i686'). Looking to the .deb packages mentioned it appears none is related to R or CRAN, and the list is about packages no longer necessary. I did 'sudo apt-get remove' and tried again. The problem is still there, and it occurs after the mirrors-window pop up, even I tried different mirrors, just in case. The download of the packages is ok, and immediatly appears the "buffer overflow" message. I tried with the update of the packages 'nlme', 'boot' and 'cluster' and the installation of 'agricolae' and 'ggplot2' with the same result: 'non-zero exit status'. Another suggestion?
OK, I would run 'sudo apt-get autoremove' and remove the unneeded packages. That may fix the problem, but my guess is that it would not. The issue seems to occur when you go to compile the packages you are downloading, so I am not even sure if it is related to R.
I would start by removing the compilers. Try: sudo apt-get remove r-base-dev gcc g++ gfortran Reboot, then reinstall r-base-dev and see if that fixes the problem. Michael
-- Dr. Michael A. Rutter School of Science Penn State Erie, The Behrend College Station Road Erie, PA 16563 http://math.bd.psu.edu/faculty/rutter
-- Dr. Michael A. Rutter School of Science Penn State Erie, The Behrend College Station Road Erie, PA 16563 http://math.bd.psu.edu/faculty/rutter _______________________________________________ R-SIG-Debian mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-debian
