Hi Johan, I have 2.13 installed on my Ubuntu 11.04 machine, but Rscript is located in /usr/bin:
snn@d630snn:~/bin$ which Rscript /usr/bin/Rscript I installed R from CRAN using the instructions at http://cran.r-project.org/bin/linux/ubuntu/README Perhaps it has something to do with how you installed R 2.13 on your machine? Regards, --Syrus On Mon, Sep 19, 2011 at 12:03 AM, Johan Nylander <[email protected]>wrote: > Dear all, > > finally decided to do an Ubuntu upgrade and a new clean R install from > http://cran.r-project.org/bin/linux/ubuntu/. > > However, while trying to install a package from R-forge I encountered > problems, involving error messages saying "Rscript execution error: No > such file or directory" (see below). > > The same procedure works on Ubuntu 11.04 running R 2.12.1-1 from the > Ubuntu repositories. > > The behavior of Rscript on my (11.04 + 2.13.1) machine: > $ which Rscript > /usr/local/bin/Rscript > $ Rscript --version > R scripting front-end version 49838 > $ Rscript -e 'rnorm(1)' > Rscript execution error: No such file or directory > > on my 11.04 + 2.12.1: > $ which Rscript > /usr/bin/Rscript > $ Rscript --version > R scripting front-end version 2.12.1 (2010-12-16) > $ Rscript -e 'rnorm(1)' > [1] 0.9278564 > > Seems like this problem has been seen before > (http://bugs.r-project.org/bugzilla3/show_bug.cgi?id=14493), and that the > wrong PATH and/or RHOME is involved. > > Any suggestions? Solutions? > > Cheers > Johan > > -------------------------------------------- > Install Error output (On Ubuntu Linux 11.04 64bit, R version 2.13.1 > (2011-07-08). R installed from CRAN Ubuntu bin repositories.) > > $ sudo R > > > > install.packages("earthmovdist", repos = "http://R-forge.R-project.org";) > Installing package(s) into /usr/local/lib/R/site-library > (as lib is unspecified) > trying URL > 'http://R-forge.R-project.org/src/contrib/earthmovdist_0.1.1.tar.gz' > Content type 'application/x-gzip' length 15819 bytes (15 Kb) > opened URL > ================================================== > downloaded 15 Kb > > * installing *source* package earthmovdist ... > ** libs > g++ -I/usr/share/R/include > -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -O3 -pipe -g -c > emdL1.cpp -o emdL1.o > g++ -I/usr/share/R/include > -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -O3 -pipe -g -c > emdL1_R.cpp -o emdL1_R.o > Rscript execution error: No such file or directory > Rscript execution error: No such file or directory > g++ -shared -o earthmovdist.so emdL1.o emdL1_R.o -L/usr/lib64/R/lib -lR > installing to /usr/local/lib/R/site-library/earthmovdist/libs > ** R > ** inst > ** preparing package for lazy loading > ** help > *** installing help indices > ** building package indices ... > ** testing if installed package can be loaded > Error in dyn.load(file, DLLpath = DLLpath, ...) : > unable to load shared object > '/usr/local/lib/R/site-library/earthmovdist/libs/earthmovdist.so': > /usr/local/lib/R/site-library/earthmovdist/libs/earthmovdist.so: > undefined symbol: _ZTIN4Rcpp7RObjectE > Error: loading failed > Execution halted > ERROR: loading failed > * removing /usr/local/lib/R/site-library/earthmovdist > > The downloaded packages are in > /tmp/RtmpdFcoSz/downloaded_packages > Warning message: > In install.packages("earthmovdist", repos = "http://R-forge.R-project.org";) > : > installation of package 'earthmovdist' had non-zero exit status > > > > _______________________________________________ > R-SIG-Debian mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/r-sig-debian > -- Syrus C. Nemat-Nasser [email protected] [[alternative HTML version deleted]]
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