On 12/19/2016 08:27 AM, Terje Jørgensen wrote:
Hi,
I am unable to install tibble, a required package for ggplot2 in R. I am
running R (version 3.3.2 ) in RStudio (version 1.0.44). My OS is ubuntu
14.04 (64 bits).
I get the same error when running R from the terminal.
Any help would be gretly appreciated.
Kind regards,
Terje
Terje,
The simplest thing to do would be to enable the cran2deb4ubuntu PPA
(https://launchpad.net/~marutter/+archive/ubuntu/c2d4u) and then you can
just "sudo apt-get install r-cran-tibble" and be good to go.
Since tibble was built on the PPA, the most likely culprit for your
issue is that the packages used to build tibble are not up to date. Do
you have the latest version of Rcpp?
Michael
****************
Error messages:
****************
install.packages("tibble")
Installing package into ‘/home/terjej/R/x86_64-pc-linux-gnu-library/3.3’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/src/contrib/tibble_1.2.tar.gz'
Content type 'unknown' length 54517 bytes (53 KB)
==================================================
downloaded 53 KB
* installing *source* package ‘tibble’ ...
** package ‘tibble’ successfully unpacked and MD5 sums checked
** libs
g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o
RcppExports.o
g++ -I/usr/share/R/include -DNDEBUG
-I"/usr/lib/R/site-library/Rcpp/include" -fpic -g -O2
-fstack-protector --param=ssp-buffer-size=4 -Wformat
-Werror=format-security -D_FORTIFY_SOURCE=2 -g -c matrixToDataFrame.cpp
-o matrixToDataFrame.o
matrixToDataFrame.cpp: In function ‘Rcpp::CharacterVector
get_names(const Rcpp::Matrix<RTYPE>&, int)’:
matrixToDataFrame.cpp:58:16: error: ‘tfm’ has not been declared
names[i] = tfm::format( "V%d", (i+1) ) ;
^
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 10;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:91:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<10>’
typename Matrix<RTYPE>::ConstColumn column( m.column(j) ) ;
^
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<10>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<10>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 13;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:92:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<13>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<13>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<13>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 14;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:93:49: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<14>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<14>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<14>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 15;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:94:49: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<15>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<15>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<15>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 16;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:95:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<16>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<16>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<16>’
matrixToDataFrame.cpp: In instantiation of ‘Rcpp::List
copy_columns(const Rcpp::Matrix<RTYPE>&) [with int RTYPE = 19;
Rcpp::List = Rcpp::Vector<19>]’:
matrixToDataFrame.cpp:96:48: required from here
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<19>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<19>’
matrixToDataFrame.cpp:71:41: error: no type named ‘ConstColumn’ in
‘class Rcpp::Matrix<19>’
make: *** [matrixToDataFrame.o] Error 1
ERROR: compilation failed for package ‘tibble’
* removing ‘/home/terjej/R/x86_64-pc-linux-gnu-library/3.3/tibble’
Warning in install.packages :
installation of package ‘tibble’ had non-zero exit status
The downloaded source packages are in
‘/tmp/RtmpxDCEIv/downloaded_packages’
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