On 3/27/24 13:33, marcoblanche...@icloud.com wrote:
Hi r-sig-debian list, first time posting here!
Something changed with the latest release of the R package for Ubuntu 22.04.
When trying to install within a Docker image with base Ubuntu LTS 22.04 (Jammy)
using the following Docker file (that I have been using for several years in
many projects) that follows the install step on the CRAN Ubuntu page
Marco,
Clipping a bunch of the output for clarity. Found the issue, but I am
not a Docker expert or regular user, so I am not going to offer a solution.
I found the issue while using a Jaunty image on a M1 Mac. The problem
is that on the Mac, it is looking for ARM packages. CRAN only has amd64
and i386, which is why r-base (which has architecture: All) is correct,
but r-base-core only has the original Jaunty ARM build. Also explains
why my PPA works, as that has ARM builds.
So this appears to be a hardware issue. Hope this helps.
Michael
$ apt policy r-base
r-base:
Installed: (none)
Candidate: 4.3.3-1.2204.0
Version table:
4.3.3-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.3.2-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.3.1-4.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.3.1-3.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.3.1-2.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.3.1-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.3.0-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.2.3-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.2.2.20221110-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.2.2-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.2.1-3.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.2.1-2.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.2.1-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.2.0-1.2204.0 500
500 https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/ Packages
4.1.2-1ubuntu2 500
500 http://ports.ubuntu.com/ubuntu-ports jammy/universe arm64 Packages
Finally, if I change the repos to M. Rutter ppa, it fixes the problem. Here�s a
working version of the Dockerfile with the changes
FROM ubuntu:22.04
USER root
ENV DEBIAN_FRONTEND noninteractive
## INSTALL R
RUN apt update \
&& apt install -y --no-install-recommends \
software-properties-common \
dirmngr \
gnupg2 \
wget \
&& wget -q -O -
https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
| tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc \
&& add-apt-repository -y "ppa:marutter/rrutter4.0"
RUN apt update -y \
&& apt install -y r-base
If this is the new way of pulling r-base with apt install, the CRAN documentation
should be updated but I have a feeling that something basic is broken somewhere that
could be easily fixed. I don�t maintain Ubuntu package so this is the extent of my
knowledge but I have many deployed pipelines referencing
cloud.r-project.org/bin/linux/ubuntu<https://cloud.r-project.org/bin/linux/ubuntu>
that will probably need updated�
Looking forward to solutions.
Marco
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