Right. The code. Sorry about that. This is what I used: plot(ANareabac_red.cap,choices=c(1,2),type='n',scaling=2) points(ANareabac_red.cap,choices=c(1,2),display='wa',pch=AN_info[,9],col=AN_info[,6],cex=1.5,scaling=2)
I don't really have any outliers so I don't think that is the problem. I will give what Andres suggested (thanks!) a shot. Colleen -- View this message in context: http://r-sig-ecology.471788.n2.nabble.com/plotting-capscale-results-using-ordiplot-in-Vegan-tp6288126p6290975.html Sent from the r-sig-ecology mailing list archive at Nabble.com. _______________________________________________ R-sig-ecology mailing list R-sig-ecology@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-ecology