Many thanks Jari - I did see that afterwards and have already forked it :-) Thanks for the great resource. Cheers, Marc
On Fri, Dec 7, 2018 at 12:28 PM Jari Oksanen <jari.oksa...@oulu.fi> wrote: > Marc, the source code of those slides is in > https://github.com/jarioksa/ordination101/. Look at the source code to > see how the slide was generated. > > cheers, Jari Oksanen > > On 7 Dec 2018, at 09:34, Marc Taylor <marchtay...@gmail.com> wrote: > > Thanks Franz! > cheers, Marc > > On Fri, Dec 7, 2018 at 7:44 AM Franz Krah <f.k...@mailbox.org> wrote: > > Hi Marc, > > This is the example in the function envfit: > > library(vegan) > data(varespec, varechem) > library(MASS) > ord <- metaMDS(varespec) > (fit <- envfit(ord, varechem, perm = 999)) > scores(fit, "vectors") > plot(ord) > plot(fit) > > Cheers, Franz > > > ----------------------------------------------------- > Franz-S. Krah (PhD student) > Ecology and Evolution of mushroom-forming fungi > > RG Biodiversity of Plants > Technical University of Munich (TUM) > Mobile: 0170 5221189 > > Website: mycolab.de > Mail: franz.k...@tum.de > —————————————————————————— > > On 7. Dec 2018, at 07:30, Marc Taylor <marchtay...@gmail.com> wrote: > > Hi all, > > a quick question: Does anyone know what vegan function was called to > produce the following permutation test in this slide of Jari's: > http://cc.oulu.fi/~jarioksa/opetus/metodi/ordination101.html#44 > > Cheers, > Marc > > [[alternative HTML version deleted]] > > _______________________________________________ > R-sig-ecology mailing list > R-sig-ecology@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-ecology > > > > > [[alternative HTML version deleted]] > > _______________________________________________ > R-sig-ecology mailing list > R-sig-ecology@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-ecology > > > [[alternative HTML version deleted]] _______________________________________________ R-sig-ecology mailing list R-sig-ecology@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-ecology