Thanks, this worked! -Molly On Nov 29, 2011, at 2:55 PM, Jan Verbesselt wrote:
> Also make sure you have the latest R.app 2.14.0 for Mac because there was an > issue when installing packages from the R.app (in case you where using this). > Please see: > http://www.mail-archive.com/[email protected]/msg00840.html > > > On 29/11/2011, at 8:55 PM, Molly Davies wrote: > >> Hello, >> >> I am unable to get gstat to load using R version 2.14.0 (2011-10-31) on >> platform x86_64-apple-darwin9.8.0/x86_64 (64 bit). The package was working >> before I updated my R version. >> >> When I tried to load gstat before i had updated it, I got the following >> error message. (I include this in case there are clues that might indicate >> the source of my problem). >>> library(gstat) >> Loading required package: spacetime >> Loading required package: xts >> Error in dyn.load(file, DLLpath = DLLpath, ...) : >> unable to load shared object >> '/Library/Frameworks/R.framework/Versions/2.14/Resources/library/gstat/libs/x86_64/gstat.so': >> dlopen(/Library/Frameworks/R.framework/Versions/2.14/Resources/library/gstat/libs/x86_64/gstat.so, >> 6): Library not loaded: >> @rpath/R.framework/Versions/2.13/Resources/lib/libR.dylib >> Referenced from: >> /Library/Frameworks/R.framework/Versions/2.14/Resources/library/gstat/libs/x86_64/gstat.so >> Reason: image not found >> In addition: Warning messages: >> 1: replacing previous import ‘is.projected’ when loading ‘spacetime’ >> 2: replacing previous import ‘proj4string’ when loading ‘spacetime’ >> 3: replacing previous import ‘proj4string<-’ when loading ‘spacetime’ >> Error: package/namespace load failed for ‘gstat’ >> >> I assumed this meant I needed to update/reinstall gstat, which I did from >> the GUI. >> >>> install.packages("gstat") >> trying URL >> 'http://cran.cnr.Berkeley.edu/bin/macosx/leopard/contrib/2.14/gstat_1.0-10.tgz' >> Content type 'application/x-gzip' length 2888795 bytes (2.8 Mb) >> opened URL >> ================================================== >> downloaded 2.8 Mb >> >> >> The downloaded packages are in >> >> /var/folders/wB/wB-s9onCFfSt45x+FPq9rE+++TI/-Tmp-//Rtmpyy3Pnp/downloaded_packages >> >> Then when I tried to load the library again, I got the following: >> >>> library(gstat) >> Error in get(Info[i, 1], envir = env) : >> internal error -3 in R_decompress1 >> Error: package/namespace load failed for ‘gstat’ >> >> I've never seen this error before. >> Following the suggestions from a message on R-sig-ME regarding the library >> lme4a: >> https://stat.ethz.ch/pipermail/r-sig-mixed-models/2011q3/006399.html >> (I think it's irrelevant here, but I have Xcode installed.) >> >> 1. I tried installing the package from R-forge (maybe this would be better?) >>> install.packages("gstat",repos="http://r-forge.r-project.org";) >> Warning message: >> In getDependencies(pkgs, dependencies, available, lib) : >> package ‘gstat’ is not available (for R version 2.14.0) >> >> 2. I downloaded the "gstat" packages directly from CRAN and installed from >> the command line: >> >> Molly$ R CMD INSTALL /Users/Molly/Downloads/gstat_1.0-10.tgz >> * installing to library >> ‘/Library/Frameworks/R.framework/Versions/2.14/Resources/library’ >> * installing *binary* package ‘gstat’ ... >> >> * DONE (gstat) >> >> Still no luck. Does anyone have any advice for me as far as how to proceed? >> I apologize in advance if my problem has already been addressed and I failed >> to find it in the list archives. If this is the case, I would very much >> appreciate it if someone could send me a link. >> >> Thanks for your time, >> >> Molly Davies >> >> _______________________________________________ >> R-sig-Geo mailing list >> [email protected] >> https://stat.ethz.ch/mailman/listinfo/r-sig-geo > _______________________________________________ R-sig-Geo mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-geo
