On 08/23/2010 05:45 PM, Kerry Ritter wrote:
Hi. I am using library "gstat" in R. My question is why do I get different SSErr's when I fit the variogram model using fit.variogram than when I fix the parameters in fit.variogram using the exact same parameters obtained from the first fit. My expectation is that these would be the same. What is SSErr actually calculating?
Thanks,
Kerry


Hi Kerry,

The following example illustrates that fit.variogram is sensitive to the start parameters you use for Gauss-Newton fitting:

data(meuse)
vgm1 <- variogram(log(zinc)~1, ~x+y, meuse)
v1 = fit.variogram(vgm1, vgm(1,"Sph",300,1))

# Use fit above as initial guess
v2 = fit.variogram(vgm1, v1)

v1
#  model     psill    range
#1   Nug 0.0506555   0.0000
#2   Sph 0.5906009 896.9702

v2
#   model      psill   range
# 1   Nug 0.05066039   0.000
# 2   Sph 0.59060578 897.006

So the difference in SSerr is caused by a different fit by fit.variogram, which in turn is caused by a different initial variogram model guess.

regards,
Paul

--
Drs. Paul Hiemstra
Department of Physical Geography
Faculty of Geosciences
University of Utrecht
Heidelberglaan 2
P.O. Box 80.115
3508 TC Utrecht
Phone:  +3130 253 5773
http://intamap.geo.uu.nl/~paul
http://nl.linkedin.com/pub/paul-hiemstra/20/30b/770

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