Robert,
I don't think we can help you unless you point us to your package to reproduce
the issue. The "no visible binding" message is very common saying that you use
unbound variables with often indicates possible bugs (typos etc.).
Cheers,
Simon
On Jun 27, 2011, at 4:10 PM, McGehee, Robert wrote:
> R Mac users,
> I have a couple of Mac-specific curiosities regarding package installation
> that I thought I'd ask the group.
>
> First, when installing packages on my Mac (and not elsewhere), I see a bunch
> of lines saying "Note: no visible binding for global variable 'xyz'" (and the
> like). A Google search on this phrase seemed to indicate that these notes can
> appear if one sets the _R_CHECK_USE_CODETOOLS_ variable. As I have not done
> this (and in fact have tried explicitly setting this variable to FALSE), I'm
> wondering if anyone knows why I get these extra notes on my Mac only.
>
> Second, a note that scrolls by for one package installation that I find
> particularly unusual is the following:
> Note: possible error in 'updateIds(doc, save = x)':
> Unused argument(s) (save = x)
>
> I've managed to whittle down my package into a single method declaration in
> the R directory that produces this note.
>
> setMethod("Ops", signature("x", "x"), function(e1, e2) {})
>
> However, there is no 'updateIds' function, and I can't seem to find that
> function anywhere in the R code base (or mine). Does anyone know what this
> means, and why I get it? Again, I can't seem to reproduce this on my Linux
> installation, only Mac.
>
> Thanks!
>
>> R.version
> _
> platform x86_64-apple-darwin10.7.0
> arch x86_64
> os darwin10.7.0
> system x86_64, darwin10.7.0
> status
> major 2
> minor 13.0
> year 2011
> month 04
> day 13
> svn rev 55427
> language R
> version.string R version 2.13.0 (2011-04-13)
>
> ## Here's how I build R, in case that matters.
> $BUILDDIR/R-$RVERS/configure r_arch=x86_64 \
> --prefix="$PREFIX/R/R-${RVERS}" \
> --build=$BUILD \
> --with-x --with-aqua=yes --enable-R-framework=no \
> --with-blas='-framework vecLib' --with-lapack \
> --x-libraries=/usr/X11/lib --x-includes=/usr/X11/include && \
> make bytecode && \
> make install && \
>
> Robert McGehee, CFA
> Geode Capital Management, LLC
> One Post Office Square, 28th Floor | Boston, MA | 02109
> Direct: (617)392-8396
>
> This e-mail, and any attachments hereto, are intended fo...{{dropped:11}}
>
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