Berend, I retried the command pdflatex without the extra export and it does not work. Assumably, this is due to the fact, that I had /usr/local/bin and /usr/local/sbin in my PATH variable and I used export PATH=/usr/bin:/bin:/usr/sbin:/sbin to get it out of my PATH (inside my .profile file).
In regard to XQuartz: True, I did and I will ad it to the sequence. Thanks for the comment, I have fully overseen this! Best Simon On Sep 13, 2013, at 10:19 AM, Berend Hasselman <[email protected]> wrote: > > On 12-09-2013, at 20:16, Simon Zehnder <[email protected]> wrote: > >> Simon, >> >> I found the fix: I needed the configure option --with-included-gettext. This >> is now the whole sequence of processes I did: >> >> 1. Install XCode (newest version) >> 2. Install Command Line Tools (in XCode) >> 3. On the shell I used sudo xcodebuild -license >> 4. I installed MacTex and MacPorts >> 5. In MacPorts I installed the ports: gcc48 (GCC 4-8-1 Compiler), >> valgrind-devel, gettext >> 6. I had to remove /usr/local/bin and /usr/local/sbin from my PATH variable, >> as these folders do not exist. >> 7. I had to add /usr/texbin to the PATH variable for R to find the pdflatex >> command. > > This bit I don't understand. > After installing MacTeX and either logging out and in or restarting > /usr/texbin should have been in PATH (at least that is the intention of > MacTeX). > > Also I assume you have XQuartz installed. If so, that should also be > mentioned in your recipe. > > Berend > > >> 8. Then I installed the Oracle JDK and added this to the config.site file in >> the R-3.0.1 folder: >> JAVA_HOME=/Library/Java/JavaVirtualMachines/jdk1.7.0_17.jdk/Contents/HomeJAVA_CPPFLAGS="-I/${JAVA_HOME}/include >> -I/${JAVA_HOME}/include/darwin" >> JAVA_LD_LIBRARY_PATH="${JAVA_HOME}/jre/lib/server" >> JAVA_LIBS="-L/${JAVA_HOME}/jre/lib/server -ljvm" >> 9. On the shell I used: >> export LANG=en_US.UTF-8 >> export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/lib/pkgconfig >> 10. In a '~/Downloads/build' folder run: >> ../R-3.0.1/configure --bindir=/usr/bin --sbindir=/usr/bin --with-system-zlib >> --enable-memory-profiling --with-blas="-framework Accelerate" --with-lapack >> --x-includes=/usr/X11/include --x-libraries=/usr/X11/lib >> --with-valgrind-instrumentation=2 OBJC="clang" LDFLAGS=-L/opt/local/lib >> CPPFLAGS=-I/opt/local/include --with-included-gettext >> 11. make && make check && sudo make install >> 12. I run on the shell (do not know why --bindir and --sbindir didn't make >> it) >> sudo ln -s /Library/Frameworks/R.framework/Resources/bin/R /usr/bin/R >> 13. I had to add >> export LANG=en_US.UTF-8 in .profile >> (defaults write org.R-project.R force.LANG en_US.UTF-8 did not work, did it >> several times with reopening the terminal) >> >> I installed the packages nloptr (this still worked) and Rcpp (this worked >> now as well - the ld error: library not found: lintel, has gone) >> >> So far this works quite nice. If there are some updates on stability I let >> you know. >> >> My config.log can be seen here: >> >> https://gist.github.com/anonymous/6541684 >> > _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
