Look at here: http://max2.ese.u-psud.fr/epc/conservation/Girondot/Publications/Blog_r/Entrees/2014/7/6_Using_system()_in_MacOSX.html
I think it is the solution. Sincerely, Marc Le 24/10/2014 06:22, Emma Sherratt a écrit :
Dear Mac R community, I wonder if anyone else has come across this issue. After installing the new Mac OS10.10 Yosemite, I am now having a strange problem. I'm trying to use movie3d and run similar functions based on this I have written myself. Specifically, when I runsystem("convert --version")sh: convert: command not found yet, it is not a path issue.Sys.getenv("PATH")[1] "/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin:/usr/local/git/bin: */opt/ImageMagick/bin*:/usr/texbin" This shows clearly that the imagemagick path is listed (and so isn't the same as the problem in this previous discussion: http://r.789695.n4.nabble.com/convert-command-not-found-in-movie3d-rgl-package-in-Mac-OS-X-td4320734.html ) Also, in Terminal, echo $PATH /usr/local/bin:/usr/local/bin:/usr/bin:/bin:/usr/sbin:/sbin:/opt/X11/bin:/usr/local/git/bin: */opt/ImageMagick/bin*:/usr/texbin The only way I have been able to get it to work is: system("/opt/ImageMagick/bin/convert --version") [1] "Version: ImageMagick 6.8.9-8 Q16 x86_64 2014-10-08 http://www.imagemagick.org"; [2] "Copyright: Copyright (C) 1999-2014 ImageMagick Studio LLC" [3] "Features: DPC OpenCL" [4] "Delegates: bzlib fftw jng jpeg lcms lzma png tiff webp xml zlib" [5] "" However, this workaround does not work for me using movie3d{rgl} Any ideas most appreciated Emma ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Emma Sherratt, PhD. Lecturer in Zoology, Zoology Division, School of Environmental and Rural Science, Room L118 Bldg C02, University of New England, Armidale, NSW, Australia, 2351 Tel: +61 2 6773 5038 email: [email protected] Caecilians are legless amphibians... * __ (\ .-. .-. /_") \\_//^\\_//^\\_// `"` `"` `"`* learn more about them here: www.emmasherratt.com/caecilians [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
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