Spencer, use
open -a R in Terminal or use Spotlight to look for R (the application) - you have probably moved it someplace non-default and unfortunately Apple's Installer is doing a really good job in upgrading the R.app that you have assigned last and apparently it's not the one in Applications. Cheers, Simon On Aug 18, 2015, at 9:20 PM, Spencer Graves <[email protected]> wrote: > Hi, Peter: > > > On 8/18/2015 4:25 AM, peter dalgaard wrote: >> On 18 Aug 2015, at 02:54 , Spencer Graves<[email protected]> >> wrote: >> >>> Hello: >>> >>> >>> After upgrading from R 3.2.1 to 3.2.2 under OS X 10.10.3, attempts to >>> start the default R GUI fail with, "Problem Report for R: R cannot be >>> opened because of a problem." "Problem Details and System Configuration" >>> are copied below. (R 3.2.2 seems to work fine within RStudio 0.98.1103.) >>> >>> >>> What do you suggest I do to fix this problem? >>> >> Dunno, it works fine for me, at least on Mavericks 10.9.5. >> >> However, the reference to Library/Frameworks/R.framework/Versions/3.1/... >> makes me suspect that you are somehow mixing versions. Perhaps clean up and >> reinstall? > > > Thanks. Now I can't find a way to start R at all outside of RStudio > after uninstalling and reinstalling. > > > What do you suggest I try next? > > > Thanks, > Spencer > > > p.s. To be precise, I ran the following as described in "4.2 Uninstalling > under OS X" in "R Installation and Administration": > > > ..$ sudo rm -rf /Library/Frameworks/R.framework > ..$ sudo rm -rf /Applications/R.app > ..$ sudo rm -rf /usr/bin/R > ..$ sudo rm -rf /usr/bin/Rscript > > > Then I double-clicked on "R-3.2.2.pkg" in Downloads. R seemed to > install, and R 3.2.2 started as expected under RStudio, but I couldn't find > stand-alone R icons. So I upgraded to 10.10.5 and double-clicked again on > "R-3.2.2.pkg". That didn't help. FYI, from within RStudio, I get the > following: > > > > sessionInfo() > R version 3.2.2 (2015-08-14) > Platform: x86_64-apple-darwin13.4.0 (64-bit) > Running under: OS X 10.10.5 (Yosemite) > > locale: > [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 > > attached base packages: > [1] stats graphics grDevices utils datasets methods base > > loaded via a namespace (and not attached): > [1] tools_3.2.2 > >> -pd >> >> >>> Thanks, >>> Spencer Graves >>> >>> >>> Problem Details and System Configuration >>> >>> >>> Process: R [569] >>> Path: /Applications/R.app/Contents/MacOS/R >>> Identifier: org.R-project.R >>> Version: ??? >>> Code Type: X86-64 (Native) >>> Parent Process: ??? [1] >>> Responsible: R [569] >>> User ID: 501 >>> >>> Date/Time: 2015-08-17 19:46:47.942 -0500 >>> OS Version: Mac OS X 10.10.3 (14D136) >>> Report Version: 11 >>> Anonymous UUID: 6621BCEA-EA0C-3D7A-AE0A-BFCE63A9A8B4 >>> >>> Sleep/Wake UUID: 9C8F92EE-E940-4B17-A64C-C0F470DFE449 >>> >>> Time Awake Since Boot: 2600 seconds >>> Time Since Wake: 700 seconds >>> >>> Crashed Thread: 0 >>> >>> Exception Type: EXC_BREAKPOINT (SIGTRAP) >>> Exception Codes: 0x0000000000000002, 0x0000000000000000 >>> >>> Application Specific Information: >>> dyld: launch, loading dependent libraries >>> >>> Dyld Error Message: >>> Library not loaded: >>> /Library/Frameworks/R.framework/Versions/3.1/Resources/lib/libR.dylib >>> Referenced from: /Applications/R.app/Contents/MacOS/R >>> Reason: image not found >>> >>> Binary Images: >>> 0x7fff6b9f0000 - 0x7fff6ba26837 dyld (353.2.1) >>> <65DCCB06-339C-3E25-9702-600A28291D0E> /usr/lib/dyld >>> >>> Model: MacBookPro11,3, BootROM MBP112.0138.B14, 4 processors, Intel Core >>> i7, 2.8 GHz, 16 GB, SMC 2.19f12 >>> Graphics: Intel Iris Pro, Intel Iris Pro, Built-In >>> Graphics: NVIDIA GeForce GT 750M, NVIDIA GeForce GT 750M, PCIe, 2048 MB >>> Memory Module: BANK 0/DIMM0, 8 GB, DDR3, 1600 MHz, 0x80AD, >>> 0x484D54343147533641465238412D50422020 >>> Memory Module: BANK 1/DIMM0, 8 GB, DDR3, 1600 MHz, 0x80AD, >>> 0x484D54343147533641465238412D50422020 >>> AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0x134), >>> Broadcom BCM43xx 1.0 (7.15.166.24.3) >>> Bluetooth: Version 4.3.4f4 15601, 3 services, 27 devices, 1 incoming serial >>> ports >>> Network Service: Wi-Fi, AirPort, en0 >>> Serial ATA Device: APPLE SSD SM1024F, 1 TB >>> USB Device: Internal Memory Card Reader >>> USB Device: BRCM20702 Hub >>> USB Device: Bluetooth USB Host Controller >>> USB Device: Apple Internal Keyboard / Trackpad >>> Thunderbolt Bus: MacBook Pro, Apple Inc., 17.1 >>> >>> _______________________________________________ >>> R-SIG-Mac mailing list >>> [email protected] >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > _______________________________________________ > R-SIG-Mac mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
