On 2019-11-02 01:51, David Winsemius wrote:
On 11/1/19 8:03 PM, Spencer Graves wrote:
Hello, All:
How can I get the dev files for libjpeg installed under macOS
10.15.1 Catalina?
You probably have the right tools, but it wouldn't hurt to check:
https://cran.r-project.org/bin/macosx/tools/
And have you installed the libjpeg library from the /libs/ directory?
http://mac.r-project.org/libs/
The directions for installation from a Terminal session are at the
bottom of the page.
I have not updated to Catalina, but the error message suggested that
jpeglib.h could not be found.
Thanks or the reply. I tried to (re)install both the tools and
libjpeg with apparent success.
However, when I tried "install.packages()" again, I got the same
error message as before.
Other thoughts, e.g., diagnostic tests?
Thanks again.
Spencer Graves
Hope this helps;
David
Simon Urbanek, the maintainer for the "jpeg" package, said I
need them to install the "jpeg" package from sources. I'm unable to
get that package to install either as a binary or from sources; see
below.
Suggestions?
Thanks,
Spencer Graves
> update.packages()
jpeg :
Version 0.1-8 installed in
/Library/Frameworks/R.framework/Versions/3.6/Resources/library
Version 0.1-8.1 available at https://cran.rstudio.com
Update? (Yes/no/cancel) y
There is a binary version available but the
source version is later:
binary source needs_compilation
jpeg 0.1-8 0.1-8.1 TRUE
Do you want to install from sources the package which needs
compilation? (Yes/no/cancel) y
installing the source package ‘jpeg’
trying URL 'https://cran.rstudio.com/src/contrib/jpeg_0.1-8.1.tar.gz'
Content type 'application/x-gzip' length 18116 bytes (17 KB)
==================================================
downloaded 17 KB
* installing *source* package ‘jpeg’ ...
** package ‘jpeg’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include"
-DNDEBUG -isysroot
/Library/Developer/CommandLineTools/SDKs/MacOSX.sdk
-I/usr/local/include -fPIC -Wall -g -O2 -c read.c -o read.o
In file included from read.c:1:
./rjcommon.h:11:10: fatal error: 'jpeglib.h' file not found
#include <jpeglib.h>
^~~~~~~~~~~
1 error generated.
make: *** [read.o] Error 1
ERROR: compilation failed for package ‘jpeg’
* removing
‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/jpeg’
* restoring previous
‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/jpeg’
The downloaded source packages are in
‘/private/var/folders/mh/mrm_14nx19g13lsnj9zmvwjr0000gn/T/Rtmp8GMSE7/downloaded_packages’
Warning message:
In install.packages(update[instlib == l, "Package"], l, repos =
repos, :
installation of package ‘jpeg’ had non-zero exit status
> update.packages()
jpeg :
Version 0.1-8 installed in
/Library/Frameworks/R.framework/Versions/3.6/Resources/library
Version 0.1-8.1 available at https://cran.rstudio.com
Update? (Yes/no/cancel) y
There is a binary version available but the
source version is later:
binary source needs_compilation
jpeg 0.1-8 0.1-8.1 TRUE
Do you want to install from sources the package which needs
compilation? (Yes/no/cancel) n
trying URL
'https://cran.rstudio.com/bin/macosx/el-capitan/contrib/3.6/jpeg_0.1-8.tgz'
Content type 'application/x-gzip' length 389601 bytes (380 KB)
==================================================
downloaded 380 KB
The downloaded binary packages are in
/var/folders/mh/mrm_14nx19g13lsnj9zmvwjr0000gn/T//Rtmp8GMSE7/downloaded_packages
> sessionInfo()
R version 3.6.1 (2019-07-05)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Catalina 10.15.1
Matrix products: default
BLAS:
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK:
/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets
[6] methods base
other attached packages:
[1] bssm_0.1.8
loaded via a namespace (and not attached):
[1] Rcpp_1.0.2 lattice_0.20-38 assertthat_0.2.1
[4] dplyr_0.8.3 crayon_1.3.4 R6_2.4.0
[7] grid_3.6.1 gtable_0.3.0 magrittr_1.5
[10] coda_0.19-3 scales_1.0.0 ggplot2_3.2.1
[13] pillar_1.4.2 rlang_0.4.1 lazyeval_0.2.2
[16] rstudioapi_0.10 diagis_0.1.3-1 tools_3.6.1
[19] glue_1.3.1 purrr_0.3.3 munsell_0.5.0
[22] compiler_3.6.1 pkgconfig_2.0.3 colorspace_1.4-1
[25] tidyselect_0.2.5 gridExtra_2.3 tibble_2.1.3
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