On Nov 27, 2005, at 4:37 PM, Alan Olav Bergland wrote: > When I attempt to run a rather hefty lme model, I get the following > error message: > >> clinal7.lme<-lme(ovn~tlc+geno+log(food), clinal, random=~tlc+geno > +log(food)|block/lat) > Error in logLik.lmeStructInt(lmeSt, lmePars) : > Calloc could not allocate (500237956 of 8) memory > R(1049,0xa000ed68) malloc: *** vm_allocate(size=4001906688) failed > (error code=3) > R(1049,0xa000ed68) malloc: *** error: can't allocate region > R(1049,0xa000ed68) malloc: *** set a breakpoint in szone_error to > debug > > > I'm running R Version 2.2.0 (2005-10-06 r35749) on a iMac running > OS 10.4.3 > > > Any suggestions?
Reformulate your problem. The lme you run with that data attempts to allocate 4GB of memory which is a bit too much. Even if you put 8GB in a G5 and run 64-bit version of R it's likely to run out of memory or to take forever ... Maybe someone will be able to help you to solve your problem in a different way if you specify more precisely what you are trying to do (including size of the data etc.). Cheers, Simon _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
