Hi all, I've been having some problems getting the bioconductor library 'EBImage' installed and running properly. It depends on imagemagick and I think I have that installed properly, I used fink imagemagick- dev 6.1.8-3 without any obvious problems. I run 10.4.7, and I was using xcode 2.0 with R version 2.4.0 beta (2006-09-24 r39502), powerpc-apple-darwin8.7.0
This is the package: http://www.bioconductor.org/packages/1.9/bioc/html/EBImage.html Here is what happens when I try to install: root# R CMD install /Users/swilts/Desktop/EBImage_1.3.105.tar.gz* Installing *source* package 'EBImage' ... [snip] /usr/bin/libtool: unknown option character `m' in: -macosx_version_min Usage: /usr/bin/libtool -static [-] file [...] [-filelist listfile [,dirname]] [-arch_only arch] [-sacLT] Usage: /usr/bin/libtool -dynamic [-] file [...] [-filelist listfile [,dirname]] [-arch_only arch] [-o output] [-install_name name] [- compatibility_version #] [-current_version #] [-seg1addr 0x#] [- segs_read_only_addr 0x#] [-segs_read_write_addr 0x#] [-seg_addr_table <filename>] [-seg_addr_table_filename <file_system_path>] [-all_load] [-noall_load] make: *** [EBImage.so] Error 1 chmod: /Library/Frameworks/R.framework/Versions/2.4/Resources/library/ EBImage/libs/ppc/*: No such file or directory So, I tried installing glibtool using fink, this didn't seem to fix anything, then I heard from a friend that maybe getting xcode 2.4 would fix libtool, I signed up and downloaded that, tried again. Now, the package seems to finish compiling but when I try to load it into R I get this: > library(EBImage) Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library '/Library/Frameworks/ R.framework/Resources/library/EBImage/libs/ppc/EBImage.so': dlopen(/Library/Frameworks/R.framework/Resources/library/EBImage/ libs/ppc/EBImage.so, 6): Symbol not found: __ZTIN6Magick9ExceptionE Referenced from: /Library/Frameworks/R.framework/Resources/library/ EBImage/libs/ppc/EBImage.so Expected in: dynamic lookup Error: package/namespace load failed for 'EBImage' > Has anyone else installed this package on a mac successfully? Any pointers even if you haven't? Is this still a problem with libtool not working properly? One friend suggested I replace libtool with glibtool, is that safe? Best, Sean _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
