Hi all, I rebuilt R from source and get the same error as before. Please tell me if I am using the correct gcc if anyone knows:
tony-chiangs-computer:~ tonychiang$ gcc --version i686-apple-darwin8-gcc-4.0.3 (GCC) 4.0.3 Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. Incidently, I tried to see if I could use the graphviz tools itself with an example I found here (search for class.dot): http://www.ffnn.nl/pages/articles/media/uml-diagrams-using-graphviz-dot.php and I get the same error I got when trying to load Rgraphviz: tony-chiangs-computer:~/src/test tonychiang$ dot -T png -o class.png class.dot dyld: Library not loaded: /usr/local/lib/graphviz/libgcc_s.1.0.dylib Referenced from: /usr/local/lib/graphviz/libgvc.2.dylib Reason: image not found Trace/BPT trap Which makes me suspect that this might be an issue with the graphviz 2.8??? I would be very interested to know if others can install from this dmg and run the example for class.dot. Thanks, --Tony On 2/8/07, Seth Falcon <[EMAIL PROTECTED]> wrote: > > "Tony Chiang" <[EMAIL PROTECTED]> writes: > > > Hi all, > > > > There seems to be a whole lot of discussion on this topic...and after > > reading the previous post, I can see that this is something that is > pretty > > non-trivial. > > > > So here is my not being able to install Rgraphviz problem: > > > > I have installed graphviz 2.8 from the dmg available at > > http://r.research.att.com/ as well as glib/gtk 1.2.10 yesterday, and > have > > just build R-2.5 from source...so I am pretty sure that I have all the > up to > > date versions of things. biocLite("Rgraphviz", type="source") is able to > > download and install the package, but I cannot seem to use the > > package: > > If you have built R from source, then you will probably have the best > luck building graphviz from source as well to ensure that R and > graphviz use the same compilers. Building graphviz from source may be > non-trivial as it probably requires various non-default devel > tools/libs. > > So one thing to try is to build the latest graphviz 2.12 from source. > > Or you can download and install the gcc that was (presumably) used to > build the graphviz 2.8 binary package and rebuild R with that. I > _think_ that would get things going as well. > > + seth > [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
