On Apr 30, 2008, at 11:42 AM, Joerg van den Hoff wrote:
On Wed, Apr 30, 2008 at 05:32:45PM +0200, Jean Thioulouse wrote:
At 10:55 AM -0400 4/30/08, Simon Urbanek wrote:
Ancient system? As a very first step for your own good I'd recommend
updating your system which is way out of date (the current version
Tiger is 10.4.11). Then if the issue persists, please report your
full sessionInfo() and machine used. The above works without
problems on both 10.5.2 and 10.4.11 (Mac Pro and iMac).
I had the same (?) problem after upgrading to R 2.7.0 on a MacPro
with
MacOS 10.5.2, using XQuartz 2.2.0.1 instead of Apple X11. I didn't
try
to dig it as I decided to start using the quartz device (very good
job)
instead.
The x11 device has no problem with tcltk though, and even with
tkrplot.
Jean
thanks for this information. so at least there seems to be a
reall issue (though I'm still under Tiger wit Apple's X11
and I don't see bus errors )
Well that above doesn't say anything in that respect - the CRAN binary
is meant to work with Apple's X11 only. If you use anything else,
you're on your own and possibly have to compile your own version. For
example if you have a different version of fontconfig it is enough to
crash since fontconfig changed the internal format of the cache.
Cheers,
Simon
regards,
joerg
sessionInfo()
R version 2.7.0 (2008-04-22)
i386-apple-darwin9.2.2
locale:
en_US/en_US/C/C/en_US/en_US
attached base packages:
[1] stats graphics grDevices utils datasets tcltk
methods
[8] base
other attached packages:
[1] ade4TkGUI_0.2-2 ade4_1.4-7
x11()
plot(0)
*** caught bus error ***
address 0xac, cause 'non-existent physical address'
Traceback:
1: axis(side = side, at = at, labels = labels, ...)
2: Axis.default(...)
3: Axis(...)
4: localAxis(xy$x, side = 1, ...)
5: plot.default(0)
6: plot(0)
Possible actions:
1: abort (with core dump, if enabled)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
Selection: 1
aborting ...
Bus error
Informations matériel :
Nom du modèle : Mac Pro
Identifiant du modèle : MacPro1,1
Nom du processeur : Dual-Core Intel Xeon
Vitesse du processeur : 2.66 GHz
Nombre de processeurs : 2
Nombre total de c¦urs : 4
Cache de niveau 2 (par processeur) : 4 Mo
Mémoire : 4 Go
Vitesse du bus : 1.33 GHz
Version de la ROM de démarrage : MP11.005C.B08
Version SMC : 1.7f10
Numéro de série : CK7270APUPZ
--
Jean Thioulouse - Labo Biometrie et Biologie Evolutive, UMR CNRS
5558
Universite Lyon 1, Batiment Mendel, 43 Boulevard du 11 Novembre
1918
69622 Villeurbanne Cedex - France http://pbil.univ-lyon1.fr/
JTHome/
Tel : (33) (0)4 72 43 27 56 Fax : (33) (0)4 72 43 13
88
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