On Jan 13, 2009, at 6:52 , Robin Hankin wrote:

Prof Brian Ripley wrote:
On Tue, 13 Jan 2009, Robin Hankin wrote:

Dear List

MacOSX 10.5.5
R-2.8.1 / R-2.9.0

I'm having difficulty  with vignettes under  Mac OS X.

Take the partitions package as an example.  According to the CRAN
package check page for partitions, this is clean under each
system, except for r-release-macosx-ix86 <http://cran.r-project.org/web/checks/check_flavors.html#r-release-macosx-ix86 > where the check gives
errors, for example:

"Running 'texi2dvi' on setpartitions.tex failed. "

Similar things happen to my other packages that include vignettes;
I can't build vignette packages under macosx either.

What's going on here?

Maybe _you_ could tell _us_? R-devel gives more informative diagnostics than the above. However, 'partitions' checks out for me on my Mac, so I've no idea what you are seeing. Surely a copy of your logs is 'at a minimum' information.


Sorry, I intended the link above to point to the log. Below text is cut-and-pasted just now from the CRAN Package Check Results for Package partitions (mac section):


... just telling us exactly which packages you have in mind would be perfectly sufficient and more informative ;).

Short story: nothing to worry about - it should go away

Long story: We do build packages incrementally, i.e. a package is only re-built if there is a new version (of the package or major R release) or the package has failed make check previously (along the concept of hope springs eternal). In the case of "partitions" it has last been built 11/13/08 which was before some updates to the TeX system on the check machine, so chances are that it wasn't happy with the TeX present then. I have re-checked the package (partitions) today and the NOTE went away. I'll check and see if any other packages are also affected and re-check them, too.

Thanks,
Simon



  * using R version 2.8.0 (2008-10-20)
  * using session charset: ASCII
  * checking for file 'partitions/DESCRIPTION' ... OK
  * checking extension type ... Package
  * this is package 'partitions' version '1.8-2'
  * checking package name space information ... OK
  * checking package dependencies ... OK
  * checking if this is a source package ... OK
  * checking for executable files ... OK
  * checking whether package 'partitions' can be installed ... OK
  * checking package directory ... OK
  * checking for portable file names ... OK
  * checking for sufficient/correct file permissions ... OK
  * checking DESCRIPTION meta-information ... OK
  * checking top-level files ... OK
  * checking index information ... OK
  * checking package subdirectories ... OK
  * checking R files for non-ASCII characters ... OK
  * checking R files for syntax errors ... OK
  * checking whether the package can be loaded ... OK
  * checking whether the package can be loaded with stated
    dependencies ... OK
  * checking whether the name space can be loaded with stated
    dependencies ... OK
  * checking for unstated dependencies in R code ... OK
  * checking S3 generic/method consistency ... OK
  * checking replacement functions ... OK
  * checking foreign function calls ... OK
  * checking R code for possible problems ... OK
  * checking Rd files ... OK
  * checking Rd cross-references ... OK
  * checking for missing documentation entries ... OK
  * checking for code/documentation mismatches ... OK
  * checking Rd \usage sections ... OK
  * checking line endings in C/C++/Fortran sources/headers ... OK
  * checking line endings in Makefiles ... OK
  * checking for portable use of $BLAS_LIBS ... OK
  * creating partitions-Ex.R ... OK
  * checking examples ... OK
  * checking tests ... OK
  * checking package vignettes in 'inst/doc' ... NOTE
    *** PDFLaTeX Errors ***
    File
/Builds/Rdev-web/QA/Simon/packages/tiger-universal/results/2.8/ partitions.Rcheck/inst/doc/partitionspaper.Rnw
    :
    Running 'texi2dvi' on 'partitionspaper.tex' failed.
    File
/Builds/Rdev-web/QA/Simon/packages/tiger-universal/results/2.8/ partitions.Rcheck/inst/doc/scrabble.Rnw
    :
    Running 'texi2dvi' on 'scrabble.tex' failed.
    File
/Builds/Rdev-web/QA/Simon/packages/tiger-universal/results/2.8/ partitions.Rcheck/inst/doc/setpartitions.Rnw
    :
    Running 'texi2dvi' on 'setpartitions.tex' failed.
  * creating partitions-manual.tex ... OK
  * elapsed time (check, wall clock): 0:47



It's clean under the other architectures.


BTW, there is no 'R-2.9.0'. If you mean 'R-devel (r47575)' or similar please say so -- too much time has been wasted in the past dealing with people using weeks-old versions of R-devel with issues that were only present for a few hours.


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