On Jul 2, 2009, at 13:04 , David Winsemius wrote:
On Jul 2, 2009, at 12:42 PM, Simon Urbanek wrote:
On Jul 2, 2009, at 10:41 , David Winsemius wrote:
I am getting a error message during an effort to use the Package
Installer with a source copy of cairoDevice:
* Installing *source* package 'cairoDevice' ...
checking for pkg-config... no
ERROR: Cannot find pkg-config.
ERROR: configuration failed for package 'cairoDevice'
--------
I seem to have pkg-config per locate from the Terminal:
david-winsemiuss-mac-pro:~ davidwinsemius$ locate pkg-config
/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/bin/
pkg-config
/sw/bin/pkg-config
/sw/share/man/man1/pkg-config.1
/usr/X11/share/man/man1/pkg-config.1.gz
/usr/share/zsh/4.3.4/functions/_pkg-config
------
The UNIX Appendix of the Installation Manual (p 29) says: "Mac OS
X comes with none of these libraries, but cairo support has been
added to the binary distribution: pkg-config is still needed and
can be compiled from the sources. "
But that is not particularly helpful to me. Is there some
environment variable or path has not been defined properly?
Yes, try
Sys.setenv(PATH=paste("/Library/Frameworks/GTK+.framework/Resources/
bin",Sys.getenv("PATH"),sep=":"))
Thanks. Unfortunately, I now get a huge number of error messages:
starting with:
trying URL 'http://lib.stat.cmu.edu/R/CRAN/src/contrib/cairoDevice_2.10.tar.gz'
Content type 'application/x-gzip' length 39058 bytes (38 Kb)
opened URL
==================================================
downloaded 38 Kb
* Installing *source* package 'cairoDevice' ...
checking for pkg-config... pkg-config
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - x86_64
gcc-4.2 -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/
Resources/include -I/Library/Frameworks/R.framework/Resources/
include/x86_64 -I/Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0 -I/Library/Frameworks/GTK
+.framework/Versions/2.14.X11/Resources/lib/gtk-2.0/include -I/
Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/
include/atk-1.0 -I/Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/cairo -I/Library/Frameworks/GTK
+.framework/Versions/2.14.X11/Resources/include/pango-1.0 -I/Library/
Frameworks/GTK+.framework/Versions/2.14.X11/Resources/include/
glib-2.0 -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/
Resources/lib/glib-2.0/include -I/Library/Frameworks/GTK+.framework/
Versions/2.14.X11/Resources/include/pixman-1 -I/Library/Frameworks/
GTK+.framework/Versions/2.14.X11/Resources/include/freetype2 -I/
Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/
include -I/Library/Frameworks/GTK+.framework/Versions/2.14.X11/
Resources/include/libpng12 -g -I/usr/local/include -fPIC -g -
O2 -c cairoDevice.c -o cairoDevice.o
In file included from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib/gtypes.h:34,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib/galloca.h:34,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib.h:32,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gobject/gtype.h:26,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gobject/gboxed.h:26,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib-object.h:25,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/gioenums.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/giotypes.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/gio.h:28,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gdk/gdk.h:32,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gtk/gtk.h:32,
from cairoDevice.h:1,
from cairoDevice.c:1:
/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/lib/
glib-2.0/include/glibconfig.h:443:2: error: #error "Unsupported
architecture"
In file included from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib/galloca.h:34,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib.h:32,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gobject/gtype.h:26,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gobject/gboxed.h:26,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib-object.h:25,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/gioenums.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/giotypes.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/gio.h:28,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gdk/gdk.h:32,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gtk/gtk.h:32,
from cairoDevice.h:1,
from cairoDevice.c:1:
/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/
include/glib-2.0/glib/gtypes.h:45: error: expected ‘=’, ‘,’, ‘;’,
‘asm’ or ‘__attribute__’ before ‘typedef’
/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/
include/glib-2.0/glib/gtypes.h:94: error: expected ‘=’, ‘,’, ‘;’,
‘asm’ or ‘__attribute__’ before ‘*’ token
In file included from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib/galloca.h:34,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib.h:32,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gobject/gtype.h:26,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gobject/gboxed.h:26,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib-object.h:25,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/gioenums.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/giotypes.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gio/gio.h:28,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gdk/gdkapplaunchcontext.h:30,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gdk/gdk.h:32,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/gtk-2.0/gtk/gtk.h:32,
from cairoDevice.h:1,
from cairoDevice.c:1:
/Library/Frameworks/GTK+.framework/Versions/2.14.X11/Resources/
include/glib-2.0/glib/gtypes.h:396:2: error: #error unknown ENDIAN
type
In file included from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/glib.h:33,
from /Library/Frameworks/GTK+.framework/Versions/
2.14.X11/Resources/include/glib-2.0/gobject/gtype.h:26,
------snipped further errors----------
(BTW: I'm not quite sure why you would try to compile it from
sources - it's available in binary from from CRAN).
It is and I have cairoDevice 2.9-2 installed, but I got this message
when I tried to load playwith 0.9-43 when using the 64 bit GUI:
Loading required package: lattice
Loading required package: cairoDevice
Error: package 'cairoDevice' is not installed for 'arch=x86_64'
In addition: Warning message:
In install.packages(c("cairoDevice"), lib = "/Library/Frameworks/
R.framework/Resources/library/", :
installation of package 'cairoDevice' had non-zero exit status
So I thought I would try to install from source.
Ah, that explains! Well, the reason why there are no 64-binaries is
the above (the GTK+ binary you have doesn't support 64-bit) --
essentially you have to build the whole GTK+ and all dependencies from
sources for x86_64 in order to use cairoDevice in 64-bit ...
Wasn't there a time in the not too distant past when Mac binary
packages in CRAN did not support the 64-bit architecture ?
They do (in the Leopard build), but only where the dependencies are
met. In this case we have to working GTK+ for 64-bit, so they are not
built.
Cheers,
Simon
I tried downloading pkgconfig-0.18 but its README file is not
sufficiently detailed for my level of understanding of the UNIX
underbelly of Mac OS X.
> sessionInfo()
R version 2.8.1 Patched (2009-01-19 r47650)
i386-apple-darwin9.6.0
locale:
en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] splines stats graphics grDevices utils datasets
methods base
other attached packages:
[1] Design_2.2-0 survival_2.35-4 Hmisc_3.6-0
loaded via a namespace (and not attached):
[1] cluster_1.12.0 grid_2.8.1 lattice_0.17-25 tools_2.8.1
Warning message:
In install.packages(c("cairoDevice"), lib = "/Library/Frameworks/
R.framework/Resources/library/", :
installation of package 'cairoDevice' had non-zero exit status
>
David Winsemius, MD
Heritage Laboratories
West Hartford, CT
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