Ahhhh..... Thanks for the patience Kasper, Simon, and Roy --Devin On Mar 29, 2010, at 3:55 PM, Roy Mendelssohn wrote:
> Nope. Scroll down that page and you will see: > > Alternative and experimental tools > > GNU Fortran 4.2.4 for Mac OS X 10.6 (Snow Leopard): > Download: gfortran-42-5646.pkg (for Xcode 3.2) > This package adds GNU Fortran to Xcode 3.2 for Snow Leopard (Apple's gcc 4.2 > build 5646). Requires Mac OS X 10.6 (Snow Leopard) and Xcode 3.2 (or 3.2.1). > > > -Roy > > > On Mar 29, 2010, at 3:50 PM, Devin Johnson wrote: > >> As you can see from the previous email I have installed Xcode 3.2.1 and from >> the first email, I've installed gfortran 4.2.3 from >> http://r.research.att.com/tools/. Is this not the corresponding gfortran? >> -Devin >> >> On Mar 29, 2010, at 3:18 PM, Simon Urbanek wrote: >> >>> >>> On Mar 29, 2010, at 18:08 , Devin Johnson wrote: >>> >>>> After installing Xcode again (3.2.1) I get the new error when building >>>> from the source posted on CRAN >>>> >>>> $ R CMD INSTALL crawl_1.1-0.tar.gz >>>> >>>> * installing to library /Users/johnsond/Library/R/ >>>> * installing *source* package crawl ... >>>> ** libs >>>> ** arch - i386 >>>> gfortran-4.2 -arch i386 -fno-common -mtune=core2 -g -O2 -c >>>> crwDriftN2ll.f90 -o crwDriftN2ll.o >>>> crwDriftN2ll.f90:0: error: bad value (core2) for -mtune= switch >>>> make: *** [crwDriftN2ll.o] Error 1 >>>> ERROR: compilation failed for package crawl >>>> * removing /Users/johnsond/Library/R//crawl >>>> * restoring previous /Users/johnsond/Library/R//crawl >>>> >>>> Is there something else that disappeared with my upgrade to SL? Or is this >>>> now a gfortran problem? >>>> >>> >>> The problem is still the same - you failing to read the docs! If you >>> bothered to read the e-mails you'd know that you have to install Xcode 3.2 >>> (or 3.2.1) and the corresponding Fortran from >>> http://r.research.att.com/tools/ >>> >>> Cheers, >>> Simon >>> >>> >>>> >>>> >>>> On Mar 29, 2010, at 2:18 PM, Simon Urbanek wrote: >>>> >>>>> >>>>> On Mar 29, 2010, at 16:45 , Devin Johnson wrote: >>>>> >>>>>> Hi, >>>>>> I have a problem compiling/installing a package that has fortran source >>>>>> code in it. I've compiled earlier versions of this package many times in >>>>>> the past as I've worked on it, but, now it's failing to install. I've >>>>>> recently go through an upgrade to snow leopard and >>>>>> installation/migration of my home directory for networking purposes at >>>>>> work (use AdmitMac with a domain account). I'm not sure which one of >>>>>> these might be causing the issue. Everything was fine before this. >>>>>> Here's the error: >>>>>> >>>>>> $ R CMD INSTALL crawl >>>>>> >>>>>> * installing to library /Users/johnsond/Library/R/ >>>>>> * installing *source* package crawl ... >>>>>> ** libs >>>>>> ** arch - i386 >>>>>> sh: make: command not found >>>>> >>>>> Please see the FAQ - you don't even have Xcode installed. >>>>> >>>>> Cheers, >>>>> Simon >>>>> >>>>> >>>>> >>>>>> ERROR: compilation failed for package crawl >>>>>> * removing /Users/johnsond/Library/R//crawl >>>>>> * restoring previous /Users/johnsond/Library/R//crawl >>>>>> >>>>>> >>>>>> Here's the gfortran version: >>>>>> >>>>>> $ gfortran --version >>>>>> GNU Fortran (GCC) 4.2.3 >>>>>> Copyright (C) 2007 Free Software Foundation, Inc. >>>>>> >>>>>> GNU Fortran comes with NO WARRANTY, to the extent permitted by law. >>>>>> You may redistribute copies of GNU Fortran >>>>>> under the terms of the GNU General Public License. >>>>>> For more information about these matters, see the file named COPYING >>>>>> >>>>>> $ which gfortran >>>>>> /usr/local/bin/gfortran >>>>>> >>>>>> The package ("crawl") is currently on CRAN and when I download the >>>>>> source, I get the same message. I've tried reinstalling R 2.10.1, >>>>>> gfortran 2.4.3, and poking around where I could, but I'm at a loss for >>>>>> what to check next. Any help would be greatly appreciated. >>>>>> >>>>>> >>>>>> ---------------------------------------------------------- >>>>>> Devin S. Johnson, Ph.D. >>>>>> Statistician >>>>>> NOAA National Marine Mammal Laboratory >>>>>> 7600 Sand Point Way NE >>>>>> Seattle, WA 98115 >>>>>> Phone: (206) 526-6867 >>>>>> Fax: (206) 526-6115 >>>>>> Email: devin.john...@noaa.gov >>>>>> ---------------------------------------------------------- >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> >>>>>> [[alternative HTML version deleted]] >>>>>> >>>>>> _______________________________________________ >>>>>> R-SIG-Mac mailing list >>>>>> R-SIG-Mac@stat.math.ethz.ch >>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>>> >>>> >>>> ---------------------------------------------------------- >>>> Devin S. Johnson, Ph.D. >>>> Statistician >>>> NOAA National Marine Mammal Laboratory >>>> 7600 Sand Point Way NE >>>> Seattle, WA 98115 >>>> Phone: (206) 526-6867 >>>> Fax: (206) 526-6115 >>>> Email: devin.john...@noaa.gov >>>> ---------------------------------------------------------- >>>> >>>> >>>> >>>> >>> >> >> ---------------------------------------------------------- >> Devin S. Johnson, Ph.D. >> Statistician >> NOAA National Marine Mammal Laboratory >> 7600 Sand Point Way NE >> Seattle, WA 98115 >> Phone: (206) 526-6867 >> Fax: (206) 526-6115 >> Email: devin.john...@noaa.gov >> >> _______________________________________________ >> R-SIG-Mac mailing list >> R-SIG-Mac@stat.math.ethz.ch >> https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > ********************** > "The contents of this message do not reflect any position of the U.S. > Government or NOAA." > ********************** > Roy Mendelssohn > Supervisory Operations Research Analyst > NOAA/NMFS > Environmental Research Division > Southwest Fisheries Science Center > 1352 Lighthouse Avenue > Pacific Grove, CA 93950-2097 > > e-mail: roy.mendelss...@noaa.gov (Note new e-mail address) > voice: (831)-648-9029 > fax: (831)-648-8440 > www: http://www.pfeg.noaa.gov/ > > "Old age and treachery will overcome youth and skill." > "From those who have been given much, much will be expected" > ---------------------------------------------------------- Devin S. Johnson, Ph.D. Statistician NOAA National Marine Mammal Laboratory 7600 Sand Point Way NE Seattle, WA 98115 Phone: (206) 526-6867 Fax: (206) 526-6115 Email: devin.john...@noaa.gov ---------------------------------------------------------- [[alternative HTML version deleted]]
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