Hi All,

I want to build a phylogenetic tree using codon alignment which is huge (280 
MB). But there is no online information about suitable substitution models for 
codon alignment: is it HKY or GTR or any other? All the information available 
is about the substitution models for protein or nucleotide sequences. If anyone 
has created a phylogenetic tree based on codon alignment, your help will be 
much appreciated.

Many thanks for your attention.

Kind regards,

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