I meet with some problem when I run PGLS analysis in 'caper' package.
First, I am doing the analysis with multiple trees (100 trees), I repeat
PGLS 100 times with the 100 trees. However, it always takes a long time to
get the result. For each variable, it usually takes 20 hours. Do you have
any suggestion to speed up?
Second, when I ran the analysis for 100 times with 100 trees, it showed:
Problem with optim:52ERROR: ABNORMAL_TERMINATION_IN_LNSRCH.
But if I just run one tree, there is no problem at all. Have you ever been
met with such problem before? How did you deal with it?
Thanks a lot in advance.
All the best,
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