Hi again,
Could this be due to the fact that the versions of R and C++ on the
server where I wish to install the R package are slightly outdated? On
the target server, they are as follows:
R 2.12.0
g++ 4.1.2
whereas on the machine where a successful installation of the same
package is running, I have
R 2.12.2
g++ 4.5.2
Thank you very much,
Cedric
On 19/07/11 16:21, Cedric Ginestet wrote:
Hi Rcpp Experts,
I have tried to install an Rcpp-based package onto a Linux server.
While the package compiles and install fine on my machine, I don't
seem to be able to install it on that server:
After R CMD INSTALL package
########################
g++ -I/share/apps/R_2.12.0/lib64/R/include -I/usr/local/include
-I"/home/cginestetbrc/R/x86_64-unknown-linux-gnu-library/2.12//Rcpp/include"
-fpic -g -O2 -c common.cpp -o common.o
/home/cginestetbrc/R/x86_64-unknown-linux-gnu-library/2.12//Rcpp/include/Rcpp/vector/Vector.h:
In member function 'void Rcpp::Vector<RTYPE>::assign_object(const T&,
Rcpp::traits::true_type) [with T = Rcpp::sugar::Vectorized<floor,
true, Rcpp::Vector<14> >, int RTYPE = 13]':
/home/cginestetbrc/R/x86_64-unknown-linux-gnu-library/2.12//Rcpp/include/Rcpp/vector/Vector.h:68:
instantiated from 'Rcpp::Vector<RTYPE>&
Rcpp::Vector<RTYPE>::operator=(const T&) [with T =
Rcpp::sugar::Vectorized<floor, true, Rcpp::Vector<14> >, int RTYPE = 13]'
common.cpp:14: instantiated from here
#########################
where the function in common.cpp is as follows (line 14 is the line
where the floor function is used):
#########################
IntegerVector disUnif(int n, int a, int b){
IntegerVector vec(n);
vec = floor(runif(n,a,b+1));
return vec;
}//disUnif
#########################
Any ideas on what I am missing?
Thanks for your help,
Cedric
--
Cedric Ginestet, PhD
Centre for Neuroimaging Sciences (L3.04)
NIHR Biomedical Research Centre
Department of Neuroimaging
Institute of Psychiatry, Box P089
King's College London
De Crespigny Park
London
SE5 8AF
http://www.kcl.ac.uk/iop/depts/neuroimaging/people/Ginestet,Cedric.aspx
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