Hi, I figured out the bug. I'm on the mac, and I had recompiled R and my application with GCC, but I had still had a bunch of libraries, which had been built in LLVM. I suppose the issue with LLVM relates to how it does memory management.
Thanks On Tue, Mar 6, 2012 at 7:11 AM, Dirk Eddelbuettel <[email protected]> wrote: > > On 5 March 2012 at 23:08, gershon bialer wrote: > | Hi, > | > | I'm trying to use RInside, but I get the seg fault show below. Does > | R's memory management somehow interfere with the C++ standard > | library memory management? What could be causing this? > > Nobody can tell, really, as you posted no code. Please do. > > There are over as dozen small, self-contained examples in the RInside sources > that you can use as a starting point. > > Also, do not forget that you canot have more than precisely one instance of > RInside in your code due to the way R is organised (single-threaded etc). > > Dirk > > | > | Program received signal EXC_BAD_ACCESS, Could not access memory. > | Reason: KERN_INVALID_ADDRESS at address: 0x0000000000000018 > | 0x0000000103b630fe in Rf_allocVector (type=24, length=262144) at > memory.c:2423 > | 2423 SNAP_NODE(s, R_GenHeap[LARGE_NODE_CLASS].New); > | (gdb) bt > | #0 0x0000000103b630fe in Rf_allocVector (type=24, length=262144) at > | memory.c:2423 > | #1 0x0000000103b638fe in R_alloc (nelem=4300886016, eltsize=262144) > | at memory.c:1976 > | #2 0x0000000103b746dd in vmmin (n0=1606401184, b=0x7fff5fbfbca0, > | Fmin=0x7fff5fbfbca0, fminfn=0x7fff5fbfbca0, fmingr=0x7fff5fbfbca0, > | maxit=1606401184, trace=1, mask=0x103840328, > | abstol=6.9532229750197531e-310, reltol=6.9532229750197531e-310, > | nREPORT=10, ex=0x0, fncount=0x7fff5fbfbcec, grcount=0x7fff5fbfbce8, > | fail=0x1036d41b0) at optim.c:513 > | #3 0x00000001027e8d09 in VR_dovm () > | #4 0x00000001000d5a17 in do_dotCode () > | #5 0x0000000100101a8a in Rf_eval () > | #6 0x000000010010414a in do_set () > | #7 0x000000010010191c in Rf_eval () > | #8 0x0000000100103172 in do_begin () > | #9 0x000000010010191c in Rf_eval () > | #10 0x0000000100105cfa in Rf_applyClosure () > | #11 0x000000010014626b in Rf_usemethod () > | #12 0x000000010014659e in do_usemethod () > | #13 0x000000010010191c in Rf_eval () > | #14 0x0000000100105cfa in Rf_applyClosure () > | #15 0x0000000100101b48 in Rf_eval () > | #16 0x000000010010414a in do_set () > | #17 0x000000010010191c in Rf_eval () > | #18 0x0000000100102442 in do_eval () > | #19 0x00000001000fa93c in bcEval () > | #20 0x00000001001016c3 in Rf_eval () > | #21 0x0000000100105cfa in Rf_applyClosure () > | #22 0x00000001000fa809 in bcEval () > | #23 0x00000001001016c3 in Rf_eval () > | #24 0x0000000100105cfa in Rf_applyClosure () > | #25 0x0000000100101b48 in Rf_eval () > | #26 0x00000001000bd2e7 in protectedEval () > | #27 0x00000001000bdb80 in R_ToplevelExec () > | #28 0x00000001000bdbfa in R_tryEval () > | #29 0x00000001000085fa in RInside::parseEval () > | #30 0x000000010000964d in RInside::parseEval () > | #31 0x0000000100028d78 in PosixTestClient::PosixTestClient () > | #32 0x00000001000299d8 in main () > | > | -- > | --------------------- > | Gershon Bialer > | _______________________________________________ > | Rcpp-devel mailing list > | [email protected] > | https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel > > -- > "Outside of a dog, a book is a man's best friend. Inside of a dog, it is too > dark to read." -- Groucho Marx -- --------------------- Gershon Bialer _______________________________________________ Rcpp-devel mailing list [email protected] https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
