Le 14/11/2013 21:34, Douglas Bates a écrit :
If I install the latest, header-only, git version of Rcpp (f117a70),
which is a great achievement by the way,
Thanks.
installation of RcppEigen
encounters a few minor problems. One seems to be related to conflicting
definitions of trunc in Rmath.h and in fstream
Likely undoRmath is done too late. This is an Rcpp problem. Many files
have moved around as part of making Rcpp header only
In file included from fastLm.cpp:23:
In file included from ./fastLm.h:25:
In file included from ../inst/include/RcppEigen.h:25:
In file included from ../inst/include/RcppEigenForward.h:39:
In file included from ../inst/include/unsupported/Eigen/SparseExtra:22:
/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../../include/c++/4.8/fstream:641:60:
error: no member named 'Rf_ftrunc' in 'std::ios_base'
In file included from ios_base::openmode __mode =
ios_base::out|ios_base::trunc)
~~~~~~~~~~^
RcppEigen.cpp:22:
In file included from ../inst/include/RcppEigen.h:25:
/home/bates/build/R-devel/include/Rmath.h:In file included from
../inst/include/RcppEigenForward.h348::3915::
In file included from note:
../inst/include/unsupported/Eigen/SparseExtra:expanded 22:
from
/usr/lib/gcc/x86_64-linux-gnu/4.8/../../../../include/c++/4.8/fstreammacro
:641'trunc'
:60: error: #define trunc ftrunc
no ^
member /home/bates/build/R-devel/include/Rmath.hnamed :247'Rf_ftrunc'
:17in : 'std::ios_base'
note: expanded from macro 'ftrunc'
#define ftrunc Rf_ftrunc
^
ios_base::openmode __mode =
ios_base::out|ios_base::trunc)
The other looks like I was playing a bit fast and loose with converting
an attribute to a list
make: *** Waiting for unfinished jobs....
fastLm.cpp:217:20: error: call to constructor of 'List' (aka
'Vector<19>') is ambiguous
List dimnames(NumericMatrix(Xs).attr("dimnames"));
^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
I'm not yet sure how to resolve this ambiguity which occupied me this
morning. This instead should work fine:
List dimnames = NumericMatrix(Xs).attr("dimnames");
There is one more problem, but I think that needs a namespace qualifier.
fastLm.cpp:240:6: error: use of undeclared identifier
'forward_exception_to_r'; did you mean 'Rcpp::forward_exception_to_r'?
forward_exception_to_r( ex );
^~~~~~~~~~~~~~~~~~~~~~
Rcpp::forward_exception_to_r
/home/bates/R/x86_64-unknown-linux-gnu-library/3.1/Rcpp/include/Rcpp/exceptions.h:172:17:
note: 'Rcpp::forward_exception_to_r' declared here
inline void forward_exception_to_r( const std::exception& ex){
^
Ah. I probably moved it to the Rcpp:: namespace, these are usually
called through the BEGIN_RCPP / END_RCPP or nowadays by compileAttributes.
Do these all look like issues that I should address in RcppEigen?
This seems more like Rcpp issues. However I'll propose a few changes to
RcppEigen so that it uses attributes. I'll make a branch and send a pull
request so that you can validate it.
--
Romain Francois
Professional R Enthusiast
+33(0) 6 28 91 30 30
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