On 13 December 2017 at 14:51, Jose wrote: | Hello, | | I am invoking some R code using RInside from a | C++ tool. Every time I invoke the code it crashes | randomly. Sometimes even with the same data. It never | crashes when I use R directly. | | I am invoking this function DESeq2::DESeq(data) which runs | a set of statistical operaions. It always crashes (when it does) | at this point "mean-dispersion relationship" and the system's log | shows that it always crashes at the same point: | | Thread 3 Crashed:: Thread (pooled) | 0 locfit.so 0x00000001229b4b34 atree_grow + 20 | (ev_atree.c:92) | 1 locfit.so 0x00000001229b4d06 atree_grow + 486 | (ev_atree.c:124) | 2 locfit.so 0x00000001229b4d06 atree_grow + 486 | (ev_atree.c:124) | 3 locfit.so 0x00000001229b4d06 atree_grow + 486 | (ev_atree.c:124) | 4 locfit.so 0x00000001229b5259 atree_start + 1033 | (ev_atree.c:167) | 5 locfit.so 0x00000001229e384d startlf + 1053 | (startlf.c:160) | 6 locfit.so 0x00000001229a7147 slocfit + 1335 | (S_enter.c:301) | 7 libR.dylib 0x000000010d0ebcd5 do_dotCode + 5973 | 8 libR.dylib 0x000000010d1183d9 Rf_eval + 1657 | (eval.c:728) | | locfit seems to be the R library for local regression fit. | | Is there something that I can do to overcome this issue?
Create smaller and smaller example that this exhibit the issue? | Why would this happen if it never happens when I invoke DESeq from R | directly?. Maybe locfit does something it is not supposed to do like threading? Dirk | Thanks for the help. | | Best, | Jose | _______________________________________________ | Rcpp-devel mailing list | Rcpp-devel@lists.r-forge.r-project.org | https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel -- http://dirk.eddelbuettel.com | @eddelbuettel | e...@debian.org _______________________________________________ Rcpp-devel mailing list Rcpp-devel@lists.r-forge.r-project.org https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
