Works great now! Thank you for digging into all these details for me. I'll keep everyone updated on usage with this powerful package.
-Marshall On Thu, Jan 15, 2009 at 8:45 PM, Greg Landrum <[email protected]> wrote: > Thanks for the additional information Marshall. > After a bit of poking around, it looks like it's a compiler bug that > can possibly be worked around: > http://mail.python.org/pipermail/cplusplus-sig/2008-April/013116.html > > Please try adding: > <toolset>gcc:<cflags>-DBOOST_PYTHON_NO_PY_SIGNATURES > to $RDBASE/Code/Jamroot > > So you'd have something like this: > project RDKit > : requirements <include>. <threading>multi > <include>$(BOOSTHOME) > <include>$(RDBASE)/External/Lapack++/include > <include>$(RDBASE)/External/vflib-2.0/include > <toolset>gcc:<cflags>-Wno-unused-function > <toolset>darwin:<cflags>-Wno-unused-function > <toolset>gcc:<cflags>-fno-strict-aliasing > <toolset>msvc:<define>WIN32 > > <target-os>windows:<include>c:/Python25/lib/site-packages/numpy/core/include > > <toolset>gcc:<include>/usr/lib/python2.5/site-packages/numpy/core/include > <toolset>gcc:<cflags>-DBOOST_PYTHON_NO_PY_SIGNATURES > > <toolset>darwin:<include>/System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python/numpy/core/include > <address-model>64:<cflags>-fPIC > # <define>RDK_USELAPACKPP #<- uncomment this to use lapack++ > <target-os>windows:<define>BOOST_NUMERIC_BINDINGS_USE_CLAPACK > <toolset>msvc:<define>_CRT_SECURE_NO_DEPRECATE > : default-build release ; > > > > > On Thu, Jan 15, 2009 at 12:43 AM, Marshall Levesque <[email protected]> > wrote: >> I'm away from the office so I'm answering this from my Gmail account. >> >> I attempted an install on Fedora release 8 (Werewolf). >> >> Attached is the output from 'yum list installed' >> >> Thanks for your help. >> >> -Marshall >> >> >> >> *Subject: **Re: [Rdkit-discuss] Build Error: GraphMol/Wrap/EditableMol.o* >> >> Dear Marshall, >> >> On Wed, Jan 14, 2009 at 1:29 AM, Marshall Levesque >> <[email protected] <mailto:[email protected]>> wrote: >> >> >> /home/marshall/boost_1_37_0/boost/type_traits/detail/cv_traits_impl.hpp:37: >> >> internal compiler error: in make_rtl_for_nonlocal_decl, at cp/decl.c:5067 >> Please submit a full bug report, >> >> >> Since this seems to be a compiler problem while building the python >> wrapper for molecules, I'd like to gather a bit more information. From >> the other text in your email message I can see that you're running g++ >> v4.1.2; which linux distribution are you using? >> >> -greg >> >> ------------------------------------------------------------------------------ >> This SF.net email is sponsored by: >> SourcForge Community >> SourceForge wants to tell your story. >> http://p.sf.net/sfu/sf-spreadtheword >> _______________________________________________ >> Rdkit-discuss mailing list >> [email protected] >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss >> >> >
