Dear Ram, On Tue, Aug 17, 2010 at 4:42 AM, ramgopal mettu <[email protected]> wrote: > Hi Greg, > I'd like to use RDKit for a visualization project I am working on, > since it has Python bindings that will hopefully make things easy for > me. I have been trying to install RDKit on OSX (Snow Leopard), but am > intimidated by installing boost etc. I came across this thread: > > http://www.mail-archive.com/[email protected]/msg00762.html > > I have downloaded the binary there and followed the instructions > (additionally adding a BOOST_ROOT environment variable), and using > /usr/bin/python, I cannot get it to work (see below). I wonder if you > have a binary version of RDKit available? I did try things without the > BOOST_ROOT variable, but I got the same errors as the original poster > in the thread above. Any assistance or suggestions you can provide > would be great -- thanks!
>From the errors below I am guessing that it's a Leopard/Snow Leopard incompatibility. The binary that is referenced in the above thread was built under Leopard. I have switched to Snow Leopard recently and now have the RDKit working properly there. If you're willing to use a non-release version (i.e. the current svn version) of the code, I can do a binary distribution for Snow Leopard sometime this week. Best Regards, -greg > Ram > > [poppy:~/software] mettu% setenv RDBASE /usr/local/RDKit/ > [poppy:~/software] mettu% setenv PYTHONPATH $RDBASE > [poppy:~/software] mettu% setenv DYLD_LIBRARY_PATH > $RDBASE/bin:$DYLD_LIBRARY_PATH > [poppy:~/software] mettu% setenv BOOST_ROOT $RDBASE/bin > [poppy:~/software] mettu% python > Python 2.6.1 (r261:67515, Feb 11 2010, 00:51:29) > [GCC 4.2.1 (Apple Inc. build 5646)] on darwin > Type "help", "copyright", "credits" or "license" for more information. >>>> setenv rdkit import RDConfig > File "<stdin>", line 1 > setenv rdkit import RDConfig > ^ > SyntaxError: invalid syntax >>>> from rdkit import RDConfig >>>> from rdkit import rdBase > Traceback (most recent call last): > File "<stdin>", line 1, in <module> > ImportError: dlopen(/usr/local/RDKit/rdkit/rdBase.so, 2): no suitable > image found. Did find: > /usr/local/RDKit/rdkit/rdBase.so: mach-o, but wrong architecture >>>> > ------------------------------------------------------------------------------ This SF.net email is sponsored by Make an app they can't live without Enter the BlackBerry Developer Challenge http://p.sf.net/sfu/RIM-dev2dev _______________________________________________ Rdkit-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
