Thanks Greg.... On 30/08/2012 10:54, Greg Landrum wrote: > Can you please do: > ldd $RDBASE/rdkit/rdBase.so > from within the same shell where you ran ctest and make sure that it's > actually finding your python library and the boost libraries you > built?
The output here looks good, among others I find libpython2.6.so.1.0 => /my/path/libpython2.6.so.1.0 libboost_python.so.1.47.0 => /my/path/libboost_python.so.1.47.0 (libboost_regex is not listed, but seems to be fine?) > The next tests are, from within that shell, to try the following: > python -c 'from rdkit import rdBase' > python -c 'from rdkit import Chem' This is interesting! The first command generates no output, the second gives me the segmentation fault... So it's a problem with the numpy version! Do you think there is any way to fix this without recompiling python? It was convenient to use this system-wide version. Maybe it's time to set up my own... f ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Rdkit-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
