Hi Eddie, I edited the rdkit formula but it still throws a error …
cmake -DCMAKE_INSTALL_PREFIX='/usr/local/Cellar/rdkit/2012.09.1' -DCMAKE_BUILD_TYPE=None -DCMAKE_FIND_FRAMEWORK=LAST -Wno-dev -DRDK_INSTALL_INTREE=OFF -DR used as include directory in directory /tmp/rdkit-wa1H/RDKit_2012_09_1/Code/ChemicalFeatures used as include directory in directory /tmp/rdkit-wa1H/RDKit_2012_09_1/Code/ChemicalFeatures used as include directory in directory /tmp/rdkit-wa1H/RDKit_2012_09_1/Code/ChemicalFeatures/Wrap -- Configuring incomplete, errors occurred! I am using boost 1_49_0 and RDKit_2012_09_1.tgz, default python 2.7.3 (I tried with Enthought python as well) other than this what are the other config i need to look ? Many thanks for the reply, Venkat On 29 Nov 2012, at 21:40, Eddie Cao <cao.yi...@gmail.com> wrote: > Hi, > > The latest rdkit homebrew formula contains a patch that fixes an issue of the > latest Q3 release. Unfortunately, the patch is not compatible with the SVN > version. What you need to do is remove the patch manually by running: > > $ brew edit rdkit > > In the editor, remove anything after line 100. Then save the file. > > Now run you should be good to go. > > Eddie > > > On Nov 25, 2012, at 4:35 AM, venkatesh Muthukrishnan wrote: > >> Dear Rdkitters, >> >> I am also having the same problem, >> >> https://sourceforge.net/mailarchive/message.php?msg_id=29947598 >> >> but when I tried the George's solution it throws a new error …. >> >> venkat:~ venkat$ brew install --HEAD rdkit >> ==> Checking out http://svn.code.sf.net/p/rdkit/code/trunk/ >> ==> Patching >> patching file CMakeLists.txt >> Hunk #1 succeeded at 146 with fuzz 2 (offset -5 lines). >> patching file Code/GraphMol/CMakeLists.txt >> Hunk #1 FAILED at 5. >> 1 out of 1 hunk FAILED -- saving rejects to file >> Code/GraphMol/CMakeLists.txt.rej >> patching file Code/JavaWrappers/gmwrapper/CMakeLists.txt >> Hunk #1 FAILED at 74. >> 1 out of 1 hunk FAILED -- saving rejects to file >> Code/JavaWrappers/gmwrapper/CMakeLists.txt.rej >> Error: Failure while executing: /usr/bin/patch -f -p1 -i 000-homebrew.diff >> >> Any ideas ?? >> >> Thanks, >> >> Venkat >> ------------------------------------------------------------------------------ >> Monitor your physical, virtual and cloud infrastructure from a single >> web console. Get in-depth insight into apps, servers, databases, vmware, >> SAP, cloud infrastructure, etc. Download 30-day Free Trial. >> Pricing starts from $795 for 25 servers or applications! >> http://p.sf.net/sfu/zoho_dev2dev_nov >> _______________________________________________ >> Rdkit-discuss mailing list >> Rdkit-discuss@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss > ------------------------------------------------------------------------------ Keep yourself connected to Go Parallel: TUNE You got it built. Now make it sing. Tune shows you how. http://goparallel.sourceforge.net _______________________________________________ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
