Dear Greg.
Thank you your quick reply !
The modified version was worked without AvalonTools .
That's nice tool .
I appreciate your kindness.
Takayuki
2013/4/22 Greg Landrum <[email protected]>
> Dear Takayuki,
>
> On Sun, Apr 21, 2013 at 1:30 PM, Taka Seri <[email protected]> wrote:
> >
> > I'm interested in this work
> > I want to use PandasTools.
> > But I got error message, "ImportError: cannot import name pyAvalonTools".
>
> I just checked in a modified version that will work when the avalon
> tools are not installed.
>
> If you want to install the avalon tools anyway, there's information
> below that shows how:
>
> >
> > So, I tried to rebuild RDKit like this.
> > $ cmake -D RDK_BUID_AVALON_SUPPORT=ON
> > But build was failed.
> >
> > -- Configuring done
> > CMake Error at Code/cmake/Modules/RDKitUtils.cmake:35 (add_library):
> > Cannot find source file:
> >
> > /common/layout.c
> >
> > Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm
> .hpp
> > .hxx .in .txx
> > Call Stack (most recent call first):
> > External/AvalonTools/CMakeLists.txt:43 (rdkit_library)
> >
> > If anyone who has suggestion, please help me.
>
> You need to tell it where to find the source for the avalon tools.
>
> - Download the source from here:
>
> http://sourceforge.net/projects/avalontoolkit/files/AvalonToolkit_1.1_beta/AvalonToolkit_1.1_beta.source.tar/download
>
> - Create an avalon tools directory somewhere, for example in
> /usr/local/src/avalontools.
> - Extract the tar file in that directory.
> - Run cmake as follows:
> cmake -DAVALONTOOLS_DIR=/usr/local/src/avalontools/SourceDistribution
> -DRDK_BUILD_AVALON_SUPPORT=ON
>
> Best,
> -greg
>
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