Hi all,
First Swig and Java:
While I was able to build the Java wrappers (2013-09-01-beta), and the
resulting jars passed the tests (at least the Java wrappers did) I am being
frustrated by the following error:
Exception in thread "main" java.lang.UnsatisfiedLinkError:
org.RDKit.RDKFuncsJNI.RWMol_MolFromMolFile__SWIG_2(Ljava/lang/String;)
Now I have org.RDKit.jar in my classpath, and can compile this application
without issue, but I am unsure how to proceed getting this app to run. I
have the path to org.RDKit.jar, libGraphMolWrap.so, and GraphMolJava.i
(which are all the same path) set in LD_LIBRARY_PATH. Even with this, I
get the same error. I must be missing something simple, but I couldn't
figure out what it is after alot of searching. At least I hope that I have
just missed something simple.
Boost:
I should add, that trying to move from the 2013-09-01-beta to the actual
release was impossible (I have been trying to make the jump for weeks). I
was unable to get cmake to find my copy of boost (even when installed from
an rpm). This is a bit frightening, as the beta accepted it after alot of
effort.
Building boost as described on the page didn't fix anything, as the
incantations to override cmakes search failed. Removal of my rpm installed
boost, in an attempt to force cmake to use my user compiled version, did
nothing as well. I have seen this has been a continual issue for users,
reading through the mailing list, and I should add my voice to those. I
don't know who's fault it is (CentOS's for rolling with a prehistoric
version of boost, CMake for just being frustrating in general, or Boost for
not building the FindBoost.cmake from a user compile). If anyone has a
workaround, I am all ears. :)
Build environment:
CentOS 6.4 (fresh install)
Boost 1.41
Swig 2.0.10
GNU compilers
Thanks in advance!
Matt
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