In [6]: opt.elemDict
Out[6]:
{0: (0.5, 0.5, 0.5),
1: (0.55, 0.55, 0.55),
7: (0, 0, 1),
8: (1, 0, 0),
9: (0.2, 0.8, 0.8),
15: (1, 0.5, 0),
16: (0.8, 0.8, 0),
17: (0, 0.8, 0),
35: (0.5, 0.3, 0.1)}
presumably, you set fluorine and sulfur by changing the values of 9 and 16.
-David
> On Feb 12, 2015, at 12:58 PM, Soren Wacker <[email protected]> wrote:
>
> but how?
> Soren
> ________________________________________
> From: Greg Landrum [[email protected]]
> Sent: Wednesday, February 11, 2015 10:27 PM
> To: Soren Wacker
> Cc: RDKit Discuss
> Subject: Re: [Rdkit-discuss] Chem.Draw darker colors
>
> My other answer about using the DrawingOptions object applies here too.
> Instead of setting elemDict to be a defaultDict, you would just change the
> colors for S and F to whatever you prefer.
>
> -greg
>
>
> On Thu, Feb 12, 2015 at 12:13 AM, Soren Wacker
> <[email protected]<mailto:[email protected]>> wrote:
>
> Hi,
>
> I printed some moecules with the Draw module of rdkit and generated some
> useful figures.
> I noticed that for some elements the contrast to white is very low.
> Therefore, I suggest to change the default colors to the darker versions.
>
> E.g. darkyellow instead of yellow for sulfur
> and darkcyan instead of cyan for fluorine
>
> kind regards
> Soren
>
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