HI,

 

I did draw sodium hexaflourophosphate (using marvin) and saved the structure
as molfile.

I have a very simple knime workflow. The workflow consist of a molfile
reader node and a rdkit 'RDKit From Molecule' node.

The readmolfile node has no problems to read the molfile. 

The rdkit ,RDKit From Molecule' node can not read the molfile (i.e. the
structure ends up in the  'Erroneous input data' output port.

The structure is drawn correct i.e. positive charge on sodium, negative
charge on the phosphor atom.

The molfile is attached to the mail.

 

Any idea why rdkit has problems with reading this molfile ?

 

Any feedback or clarification is appreciated.

Best

Hans-Juergen

Attachment: sodium_hexaflourophosphate.mol
Description: Binary data

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