On 6/27/2015 5:45 AM, Greg Landrum wrote: ... > That's assuming that the futures code (which I don't know) isn't doing > anything odd behind the scenes to hold onto references.
Or every mol in supplier holds a pointer to c++ dll that python vm doesn't quite know how to garbage-collect, which keeps a still-referenced object inside the job, which means jobs=[] creates a new array without deleting the old jobs. Who knows. The first answer was the right one: process one molecule at a time. Even better, split the input file into one-per-molecule, then use ec2 or condor or osg to run your one-at-a-time script on all of them at once. Dima ------------------------------------------------------------------------------ Monitor 25 network devices or servers for free with OpManager! OpManager is web-based network management software that monitors network devices and physical & virtual servers, alerts via email & sms for fault. Monitor 25 devices for free with no restriction. Download now http://ad.doubleclick.net/ddm/clk/292181274;119417398;o _______________________________________________ Rdkit-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
