On 01/20/2016 10:06 AM, Peter Shenkin wrote:

... the terrible old PDB file format ...

> As for those who would write that format, fight it! :-)
> 
> The above, in my view, represents the voice of reason, and is therefore
> unlikely to be generally adopted....

The long story is that most applications actually using the data need
only the table of coordinates and that's pretty much what PDB file is.
PDB's replacement: mmCIF includes everything and the kitchen sink
wrapped in a subset of STAR-98 syntax. All of that is excess baggage
nobody wants. As much as PDB wants the old busted PDB format gone, they
are not offering a usable alternative that I know of.

That's exactly what we've been doing at BMRB, too, and then complaining
about low rate of adoption of NMR-STAR by the NMR community.

-- 
Dimitri Maziuk
Programmer/sysadmin
BioMagResBank, UW-Madison -- http://www.bmrb.wisc.edu

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