Back again!
I apologize for resurrecting an old topic, but I'm once again trying to
work with PyMOL through RDKit. I've been following the approach in this
thread (
http://www.mail-archive.com/rdkit-discuss%40lists.sourceforge.net/msg00325.html)
but it seems not to work any longer. I'm using PyMOL 1.8 on Fedora and I
see that the xml-rpc file is current, so that's no longer a problem. When
I step through the process and hit this step:
s.ShowMol(m,name='ligand',showOnly=False)
nothing happens in the PyMOL viewer. It just remains blank.
Any updates on operating with PyMOL?
-Kirk
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