It's easy enough to make this an option, but given that it is part of the SDF 
spec (as Andrew has pointed out) the only reason I can think of to do so would 
be because it causes problems for some other piece of (likely commonly used) 
software.
Are the sequence numbers causing a problem for you?
-greg






On Sat, Dec 17, 2016 at 1:46 AM +0100, "Milinda Samaraweera" 
<milindaatw...@gmail.com> wrote:










Dear Users,

I was using the SDWriter in the rdkit kit to generate a SD file with mutiple 
entries generated using smiles and later assign SD tag data (e.g. pubchem_ID, 
IUPAC_name, etc).

However at the end of each tag header I noticed there is a number (bolded):

...
>  <Name_IUPAC_CAS>  (1) 
N1-(2-ethylbutyl)hexane-1,3,6-triamine

>  <PubChemID>  (1) 
118903148

...
M  END
>  <Name_IUPAC_CAS>  (2) 
N1,N2-dimethyl-N2-[3-(methylamino)propyl]-N1-propylpropane-1,2-diamine

>  <PubChemID>  (2) 
118883401

What is this number and how you avoid printing this number when SDwriter is 
used? As this number is not found in standard SD files.

Thanks,
CodeMAK







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