I just came across this paper 
http://pubs.acs.org/doi/abs/10.1021/acs.jctc.7b00764 which presents an variant 
of the Fewest Bonds First with Constructive Count Vector method by Crabtree and 
Mehta (https://dl.acm.org/citation.cfm?id=1498697)

Has anyone implemented anything similar in with RDKit?

I'd also be interested in any other atom mapping code using RDKit

Best regards, Jan
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