Hi, Does anyone have a magic recipe for getting rdkit to work with python 3.5 in Anaconda3? I am trying to create a conda environment that will allow me to run rdkit and tensorflow. I have Anaconda3 installed (Windows 10). That installs Python 3.6 by default. So I created an environment for Python 3.5 (which is what tensorflow wants) conda create -n py35 python=3.5 activate py35 conda install -c anaconda tensorflow conda install -c rdkit rdkit both install. Tensorflow works, but from rdkit import Chem gives Fatal Python error: PyThreadState_Get: no current thread I read some old posts on this and downgraded Python to 3.5.4, then 3.5.3 and finally 3.5.0. I've tried removing and recreating the environment. Same error. I've tried just installing rdkit. Same error. I've spent all day on this, I'm hoping someone has tried this and has a solution! Is there a specific rdkit version I should try? People must have run rdkit in Anaconda with Python 3.5 in the past. Jon T. Swanson, Ph.D. ChemModeling, LLC Suite 101, 500 Huber Park Ct. Weldon Spring, MO 63304 (636) 329-0300 |
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