Dear Frank,
I am just guessing here, mostly based on a quick Google search, so
please bear with me if I am wrong.
Could it be that Boost 1.68 and the RDKit were built with different
versions of gcc, i.e. the built-in 4.7 and a devtoolset version? I would
make sure that both Boost and the RDKit were built with the latest
devtoolset-7
<https://www.softwarecollections.org/en/scls/rhscl/devtoolset-7/> toolchain.
I hope the above helps; if not, please reply to me off-list with details
on the compiler toolchain that you used and I will try to reproduce the
issue.
Best,
Paolo
On 10/24/18 17:32, Oellien, Frank wrote:
Hi,
I am trying to compile RDKit on a RHEL7 system using Python 2.7 and
Boost 1.68 and I retrieve the following issue:
64%] Linking CXX executable testReaction
../../../lib/libRDKitChemReactions.so.1.2019.03.1dev1: undefined
reference to
`boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::load_override(boost::archive::class_name_type&)'
../../../lib/libRDKitChemReactions.so.1.2019.03.1dev1: undefined
reference to
`boost::archive::archive_exception::archive_exception(boost::archive::archive_exception
const&)'
../../../lib/libRDKitChemReactions.so.1.2019.03.1dev1: undefined
reference to
`boost::archive::text_iarchive_impl<boost::archive::text_iarchive>::load(std::__cxx11::basic_string<char,
std::char_traits<char>, std::allocator<char> >&)'
../../../lib/libRDKitChemReactions.so.1.2019.03.1dev1: undefined
reference to
`boost::archive::text_oarchive_impl<boost::archive::text_oarchive>::save(std::__cxx11::basic_string<char,
std::char_traits<char>, std::allocator<char> > const&)'
collect2: error: ld returned 1 exit status
make[2]: *** [Code/GraphMol/ChemReactions/testReaction] Error 1
make[1]: ***
[Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/all] Error 2
make: *** [all] Error 2
Has somebody already seen this error?
Best regards,
Frank
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