Hi Eric, On Fri, Nov 2, 2018 at 2:00 PM Eric Jonas <jo...@ericjonas.com> wrote:
> Hello! I'm trying to figure out if there's any known or sane way to > automatically plot numerical values adjacent to atoms using the rdkit > drawing machinery. Ideally I'd like to annotate certain atoms > programmatically with values. I think the conventional way this is done for > publication is post-hoc editing in illustrator but it would be great if > there was an automatic or supported mechanism. > Doing this correctly is on the list of high-priority things to do, and I really hope to have something done for the 2019.03 release, but there's no way I can guarantee that (it's a hard problem). In the meantime, there's a way to at least do something that is, hopefully, better than nothing: https://gist.github.com/greglandrum/8cf8ecc3253abf0a5139a776a5095163 displayed here: https://nbviewer.jupyter.org/gist/greglandrum/8cf8ecc3253abf0a5139a776a5095163
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