Is there any more deterministic procedure than the one of trying until success is obtained?

How do I determine the InChI string of a conformer obtained after multiple embedding? I know how to do it for a molecule, so, how do I make a molecule from a conformer?

All the best,

Jean-Marc



Le 17/12/2018 17:07, Dmitri Maziuk via Rdkit-discuss a écrit :
On Mon, 17 Dec 2018 14:23:32 +0100
JEAN-MARC NUZILLARD <[email protected]> wrote:
...
returns DIFFERENT.

Removing the EmbedMolecule step returns EQUAL.

How could I change that?

You could try generating multiple conformers instead and checking if
one of them returns EQUAL.


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