Dear RDKitters,

Is there a way to fragment a molecule by a given radius, as done by the
ECFP (aka circular, Morgan) fingerprint function
AllChem.GetMorganFingerprintAsBitVect(mol, radius=radius, nBits=nBits). I
want to visualize the fragments that ECFP fingerprint generates for a set
of molecules.

Thanks in advance.
Thomas


-- 

======================================================================

Dr Thomas Evangelidis

Research Scientist

IOCB - Institute of Organic Chemistry and Biochemistry of the Czech Academy
of Sciences <https://www.uochb.cz/web/structure/31.html?lang=en>
Prague, Czech Republic
  &
CEITEC - Central European Institute of Technology <https://www.ceitec.eu/>
Brno, Czech Republic

email: teva...@gmail.com

website: https://sites.google.com/site/thomasevangelidishomepage/
_______________________________________________
Rdkit-discuss mailing list
Rdkit-discuss@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/rdkit-discuss

Reply via email to