FWIW: there are already postgresql 10 builds up: (rdkit_psql10) glandrum@otter:/scratch/RDKit_git/build$ conda list | grep postgr postgresql 10.5 h1ad7b7a_0 rdkit-postgresql 2019.03.3.0 hc51617d_0 rdkit
Assuming everything works, I should have builds for v11 up this afternoon. -greg On Thu, Jul 4, 2019 at 1:45 PM Greg Landrum <greg.land...@gmail.com> wrote: > In the meantime we (=I) can also try doing conda builds for more recent > versions. > > -greg > > > On Mon, Jul 1, 2019 at 8:26 PM Paolo Tosco <paolo.tosco.m...@gmail.com> > wrote: > >> Hi John, >> >> yes, it is, I have myself compiled the RDKit PostgreSQL cartridge against >> Postgres 11. >> >> It should just be a matter of adding the following flags to the cmake >> command: >> >> -DPostgreSQL_ROOT=/usr/pgsql-11 \ >> -DPostgreSQL_INCLUDE_DIR=/usr/pgsql-11/include \ >> -DPostgreSQL_TYPE_INCLUDE_DIR=/usr/pgsql-11/include/server \ >> -DPostgreSQL_LIBRARY_DIR=/usr/pgsql-11/lib \ >> -DRDK_BUILD_PGSQL=ON \ >> -DRDK_PGSQL_STATIC=ON \ >> and it should work. >> Feel free to get back to me off-list if the above does not work for you; >> also, it would be useful to see the error messages that you are getting. >> >> Best, >> Paolo >> >> On 07/01/19 18:50, John Irwin wrote: >> >> Hi - >> >> I notice that the anaconda installation of RDKit is with Postgres 9.6. >> We tried to install RDKit with Postgres 10.4 and 11 and struggled to >> compile from source. >> Meanwhile, Postgres 12 is already in beta and we don't want to get too >> far behind. >> Is RDKit compatible with Postgres 11? >> >> Thanks >> >> John >> >> John Irwin >> UCSF Pharmaceutical Chemistry >> http://irwinlab.compbio.ucsf.edu >> >> >> >> >> _______________________________________________ >> Rdkit-discuss mailing >> listRdkit-discuss@lists.sourceforge.nethttps://lists.sourceforge.net/lists/listinfo/rdkit-discuss >> >> >> _______________________________________________ >> Rdkit-discuss mailing list >> Rdkit-discuss@lists.sourceforge.net >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss >> >
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