Dear RDkitters,

I am playing around with the assignstereochemistry function and I am getting 
confused. If I change the numbering of the atoms but not their coordinates (for 
example switch to canonical numbering) I get a different answer. In fact it 
only seems to work right when I switch to canonical numbering with openbabel. 

What rules does the function follow? Is there any role played by the numbering 
of atoms? Do they have to be numbered in any special way for example the groups 
need to follow each other when assigning CIP priority?  

Thanks

_______________________________________________
Rdkit-discuss mailing list
Rdkit-discuss@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/rdkit-discuss

Reply via email to