URL:
<http://gna.org/task/?func=detailitem&item_id=1778>
Summary: Submission of StabFlex
Project: Gna! Administration
Submitted by: beb0s
Submitted on: mar 31/05/2005 presso 14:04
Status: None
Approval Status: None
Should Start On: mar 31/05/2005 presso 00:00
Should be Finished on: ven 10/06/2005 presso 00:00
Category: Project Approval
Priority: 5 - Normal
Privacy: Public
Assigned to: None
Open/Closed: Open
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Details:
Site Admin. Approval/Edition URL:
<https://gna.org/admin/groupedit.php?group_id=1067>
###### ORIGINAL SUBMISSION DETAILS ######
System Group Name:
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stabflex
Full Name:
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StabFlex
Type:
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Programs
License:
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GNU General Public License V2 or later
Other License:
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Description:
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StabFlex [1] is a very simple python original reimplementation of FlexStab
[2] from Kerem, Batsheva.
StabFlex can be used by genetists and molecular biologists for studying some
properties of DNS sequences. Like FlexStab, StabFlex calculates helix
stability and flexibility of a given DNA sequence, in overlapping windows
along the sequence.
I would like to distribute StabFlex program as a simple script for usability
purpose (It should be simple to use for scientists who aren't familiar with
software installation).
StabFlex also is in my GNU Arch repository at [3]. Project name is
stabflex--head--0.1
I'm planning to release StabFlex in few weeks.
[1] http://poisson.phc.unipi.it/~andrea/stabflex
[2] http://leonardo.ls.huji.ac.il/departments/genesite/faculty/bkerem.htm
[3] http://poisson.phc.unipi.it/~andrea/archives/
Other Software Required:
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Excluding standard python library, StabFlax uses BioPython[1] library for
acceding Fasta sequence data format and Biggles[2] library for making plots.
[1] http://biopython.org/
[2] http://biggles.sourceforge.net/
Other Comments:
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