Author: bugman
Date: Thu Jan 15 10:19:11 2009
New Revision: 8453
URL: http://svn.gna.org/viewcvs/relax?rev=8453&view=rev
Log:
Created the API base method target_mol_name() for generating the list of
molecule names.
Modified:
branches/multi_structure/generic_fns/structure/api_base.py
Modified: branches/multi_structure/generic_fns/structure/api_base.py
URL:
http://svn.gna.org/viewcvs/relax/branches/multi_structure/generic_fns/structure/api_base.py?rev=8453&r1=8452&r2=8453&view=diff
==============================================================================
--- branches/multi_structure/generic_fns/structure/api_base.py (original)
+++ branches/multi_structure/generic_fns/structure/api_base.py Thu Jan 15
10:19:11 2009
@@ -36,6 +36,7 @@
# relax module import.
from data.relax_xml import fill_object_contents, xml_to_object
from relax_errors import RelaxError, RelaxFileError, RelaxImplementError
+from relax_io import file_root
from relax_warnings import RelaxWarning
@@ -347,6 +348,31 @@
model.mol.add_item(mol_name=set_mol_name[j],
mol_cont=data_matrix[i][j])
+ def target_mol_name(self, set=None, target=None, index=None, mol_num=None,
file=None):
+ """Add the new molecule name to the target data structure.
+
+ @keyword set: The list of new molecule names. If not supplied,
the names will be
+ generated from the file name.
+ @type set: None or list of str
+ @keyword target: The target molecule name data structure to which
the new name will be
+ appended.
+ @type target: list
+ @keyword index: The molecule index, matching the set argument.
+ @type index: int
+ @keyword mol_num: The molecule number.
+ @type mol_num: int
+ @keyword file: The name of the file, excluding all directories.
+ @type file: str
+ """
+
+ # Set the target molecule name.
+ if set:
+ target.append(set[index])
+ else:
+ # Set the name to the file name plus the structure number.
+ target.append(file_root(file) + '_mol' + `mol_num`)
+
+
def to_xml(self, doc, element):
"""Prototype method for converting the structural object to an XML
representation.
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