Author: bugman
Date: Tue Jan 20 16:21:00 2009
New Revision: 8547
URL: http://svn.gna.org/viewcvs/relax?rev=8547&view=rev
Log:
Some fixes for the test_load_scientific_results() system test.
This is for the new structural data data structure design.
Modified:
branches/multi_structure/test_suite/system_tests/structure.py
Modified: branches/multi_structure/test_suite/system_tests/structure.py
URL:
http://svn.gna.org/viewcvs/relax/branches/multi_structure/test_suite/system_tests/structure.py?rev=8547&r1=8546&r2=8547&view=diff
==============================================================================
--- branches/multi_structure/test_suite/system_tests/structure.py (original)
+++ branches/multi_structure/test_suite/system_tests/structure.py Tue Jan 20
16:21:00 2009
@@ -117,17 +117,21 @@
# Test the structure metadata.
self.assert_(hasattr(cdp, 'structure'))
- self.assertEqual(cdp.structure.file, ['Ap4Aase_res1-12.pdb'])
- self.assertEqual(cdp.structure.path, [''])
self.assert_(hasattr(cdp.structure, 'structural_data'))
self.assert_(len(cdp.structure.structural_data))
- print cdp.structure.structural_data
+ self.assert_(len(cdp.structure.structural_data[0].mol))
+
+ mol = cdp.structure.structural_data[0].mol[0]
+ self.assertEqual(mol.file_name, 'Ap4Aase_res1-12.pdb')
+ self.assertEqual(mol.file_path, '')
+ self.assertEqual(mol.file_model, 1)
+ self.assertEqual(mol.file_struct_num, 1)
# The real atomic data.
res_name = ['GLY', 'PRO', 'LEU', 'GLY', 'SER', 'MET', 'ASP', 'SER',
'PRO', 'PRO', 'GLU', 'GLY']
# Check the atomic data.
-
self.assertEqual(cdp.structure.structural_data[0].peptide_chains[0].sequence(),
res_name)
+ self.assertEqual(mol.sequence(), res_name)
def test_read_pdb_internal1(self):
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