Author: bugman
Date: Fri Sep 5 17:40:32 2014
New Revision: 25675
URL: http://svn.gna.org/viewcvs/relax?rev=25675&view=rev
Log:
Updated the Morin et al, 2014 paper (the relax relaxation dispersion paper)
reference in the manual.
The paper now has volume and page information.
Modified:
trunk/docs/latex/bibliography.bib
Modified: trunk/docs/latex/bibliography.bib
URL:
http://svn.gna.org/viewcvs/relax/trunk/docs/latex/bibliography.bib?rev=25675&r1=25674&r2=25675&view=diff
==============================================================================
--- trunk/docs/latex/bibliography.bib (original)
+++ trunk/docs/latex/bibliography.bib Fri Sep 5 17:40:32 2014
@@ -5316,14 +5316,215 @@
}
@Article{Morin14,
- author = {Morin, S. and Linnet, T. E. and Lescanne, M. and Schanda, P. and
Thompson, G. S. and Tollinger, M. and Teilum, K. and Gagn\'e, S. and Marion, D.
and Griesinger, C. and Blackledge, M. and d'Auvergne, E. J.},
- title = {relax: the analysis of biomolecular kinetics and thermodynamics
using {NMR} relaxation dispersion data},
- journal = bioinformatics,
- abstract = {Nuclear Magnetic Resonance (NMR) is a powerful tool for
observing the motion of biomolecules at the atomic level. One technique, the
analysis of relaxation dispersion phenomenon, is highly suited for studying the
kinetics and thermodynamics of biological processes. Built on top of the relax
computational environment for NMR dynamics is a new dispersion analysis
designed to be comprehensive, accurate and easy to use. The software supports
more models, both numeric and analytic, than current solutions. An automated
protocol, available for scripting and driving the GUI, is designed to simplify
the analysis of dispersion data for NMR spectroscopists. Decreases in
optimisation time are granted by parallelisation for running on computer
clusters and by skipping an initial grid search by using parameters from one
solution as the starting point for another â using analytic model results for
the numeric models, taking advantage of model nesting, and using averaged
non-clustered results for the clustered analysis.Availability: The software
relax is written in Python with C modules and is released under the GPLv3+
licence. Source code and precompiled binaries for all major operating systems
are available from http://www.nmr-relax.com. Contact: [email protected]},
- url =
{http://bioinformatics.oxfordjournals.org/content/early/2014/04/09/bioinformatics.btu166.abstract},
- eprint =
{http://bioinformatics.oxfordjournals.org/content/early/2014/04/09/bioinformatics.btu166.full.pdf+html},
- doi = {10.1093/bioinformatics/btu166},
- year = {2014}
+ Author = {Morin, S. and Linnet, T. E. and Lescanne, M. and
+ Schanda, P. and Thompson, G. S. and Tollinger, M. and
+ Teilum, K. and Gagne, S. and Marion, D. and Griesinger,
+ C. and Blackledge, M. and d'Auvergne, E. J.},
+ Title = {{r}elax: the analysis of biomolecular kinetics and
+ thermodynamics using {NMR} relaxation dispersion data.},
+ Journal = bioinformatics,
+ Volume = {30},
+ Number = {15},
+ Pages = {2219-2220},
+ abstract = {Nuclear magnetic resonance (NMR) is a powerful tool
+ for observing the motion of biomolecules at the atomic
+ level. One technique, the analysis of relaxation
+ dispersion phenomenon, is highly suited for studying
+ the kinetics and thermodynamics of biological
+ processes. Built on top of the relax computational
+ environment for NMR dynamics is a new dispersion
+ analysis designed to be comprehensive, accurate and
+ easy-to-use. The software supports more models, both
+ numeric and analytic, than current solutions. An
+ automated protocol, available for scripting and driving
+ the graphical user interface (GUI), is designed to
+ simplify the analysis of dispersion data for NMR
+ spectroscopists. Decreases in optimization time are
+ granted by parallelization for running on computer
+ clusters and by skipping an initial grid search by
+ using parameters from one solution as the starting
+ point for another -using analytic model results for the
+ numeric models, taking advantage of model nesting, and
+ using averaged non-clustered results for the clustered
+ analysis. AVAILABILITY AND IMPLEMENTATION: The software
+ relax is written in Python with C modules and is
+ released under the GPLv3+ license. Source code and
+ precompiled binaries for all major operating systems
+ are available from http://www.nmr-relax.com. CONTACT:
+ [email protected].},
+ authoraddress = {PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen,
+ GermanyPROTEO, Universite Laval, Quebec G1V 0A6,
+ Canada, International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany. ;
+ PROTEO, Universite Laval, Quebec G1V 0A6, Canada,
+ International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen,
+ GermanyPROTEO, Universite Laval, Quebec G1V 0A6,
+ Canada, International AIDS Society HQ, CH-1202 Geneva,
+ Switzerland, Department of Biology, University of
+ Copenhagen, DK-2200 Denmark, Institut de Biologie
+ Structurale, Grenoble F-38027, France, Astbury Centre
+ for Structural Molecular Biology, University of Leeds,
+ Leeds LS2 9JT, UK, Institute of Organic Chemistry \&
+ CMBI, University of Innsbruck, A-6020, Austria and
+ NMR-based Structural Biology, Max Planck Institute for
+ Biophysical Chemistry, D-37077 Gottingen, Germany.},
+ language = {eng},
+ medline-aid = {btu166 [pii] ; 10.1093/bioinformatics/btu166 [doi]},
+ medline-ci = {(c) The Author 2014. Published by Oxford University
+ Press.},
+ medline-crdt = {2014/04/26 06:00},
+ medline-da = {20140719},
+ medline-dep = {20140409},
+ medline-edat = {2014/04/26 06:00},
+ medline-fau = {Morin, Sebastien ; Linnet, Troels E ; Lescanne,
+ Mathilde ; Schanda, Paul ; Thompson, Gary S ;
+ Tollinger, Martin ; Teilum, Kaare ; Gagne, Stephane ;
+ Marion, Dominique ; Griesinger, Christian ; Blackledge,
+ Martin ; d'Auvergne, Edward J},
+ medline-is = {1367-4811 (Electronic) ; 1367-4803 (Linking)},
+ medline-jid = {9808944},
+ medline-jt = {Bioinformatics (Oxford, England)},
+ medline-lid = {10.1093/bioinformatics/btu166 [doi]},
+ medline-mhda = {2014/04/26 06:00},
+ medline-oid = {NLM: PMC4103588},
+ medline-own = {NLM},
+ medline-phst = {2014/04/09 [aheadofprint]},
+ medline-pl = {England},
+ medline-pmc = {PMC4103588},
+ medline-pmid = {24764461},
+ medline-pst = {ppublish},
+ medline-pt = {Journal Article},
+ medline-sb = {IM},
+ medline-so = {Bioinformatics. 2014 Aug 1;30(15):2219-20. doi:
+ 10.1093/bioinformatics/btu166. Epub 2014 Apr 9.},
+ medline-stat = {In-Process},
+ url =
{http://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?cmd=prlinks&dbfrom=pubmed&retmode=ref&id=24764461},
+ doi = {10.1093/bioinformatics/btu166},
+ year = 2014
}
@Article{MorinGagne09a,
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